Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cobi2g02453 | ATGATAACACACCAAATATCTCTCCAATGGACTCCTCTACTCAAACACAAACCTCAGAAGAACCATTTATCATTCAACAACTTCAACACCAGATTACAACCTGTGAAGTCTTCATCCTTTGATTACAACCACCATACCACCCACTACGAGTACGAGAAAGGTTTAATTGGAAGCACCGGCCACCAATACCCTAGGCCGACGGAGGTCCCATGGAAGAAGGAACTCTGCAATTCCGTTCAACTCATCGGAACCGTCGGTACTCCGGTTGAGCTTAAGCAGCTTACCTCCGGCAAGGTCCTCGCTTGGTGCCGCCTCGCACTCAAGAAATCGTCAACCGATACTACCTGGGTTAATTTGACATTTTGGGATCAACTGGCGCATATTGCTTCTCACCATGTGGAAAAAGGCCAGCAGATATACGTCACGGGCCGTCTTGTTTCGGATACGGTTGACAGTGATGATGGCAAGCAACAGACATACTATAAGGTAGTTGTTCAACAGCTAAACTTTGTTGAAAGAAGCCCGCTTTCTAATAACGGAGACTTCAACTTCAATTCCAATTCCAATTCCAATTCCATTTCGAGCTCTATGACTATGACAACAGGCAATTACTTTTATAACTTATACCTGTCTTGA | 636 | 44.65 | MITHQISLQWTPLLKHKPQKNHLSFNNFNTRLQPVKSSSFDYNHHTTHYEYEKGLIGSTGHQYPRPTEVPWKKELCNSVQLIGTVGTPVELKQLTSGKVLAWCRLALKKSSTDTTWVNLTFWDQLAHIASHHVEKGQQIYVTGRLVSDTVDSDDGKQQTYYKVVVQQLNFVERSPLSNNGDFNFNSNSNSNSISSSMTMTTGNYFYNLYLS | 211 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cobi2g02453 | 211 | Pfam | Single-strand binding protein family | 77 | 170 | IPR000424 | GO:0003697(InterPro) | |
| Cobi2g02453 | 211 | ProSiteProfiles | Single-strand binding (SSB) domain profile. | 75 | 172 | IPR000424 | GO:0003697(InterPro) | |
| Cobi2g02453 | 211 | PANTHER | SINGLE-STRANDED DNA-BINDING PROTEIN | 40 | 175 | IPR011344 | GO:0003697(InterPro)|GO:0003697(PANTHER)|GO:0006260(InterPro)|GO:0006264(PANTHER)|GO:0009295(PANTHER)|GO:0042645(PANTHER)|GO:0051096(PANTHER) | |
| Cobi2g02453 | 211 | NCBIfam | single-stranded DNA-binding protein | 76 | 192 | IPR011344 | GO:0003697(InterPro)|GO:0006260(InterPro) | |
| Cobi2g02453 | 211 | Gene3D | - | 73 | 181 | IPR012340 | - | |
| Cobi2g02453 | 211 | SUPERFAMILY | Nucleic acid-binding proteins | 76 | 197 | IPR012340 | - | |
| Cobi2g02453 | 211 | CDD | SSB-OBF | 79 | 170 | IPR000424 | GO:0003697(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cobi2g02453 | K03111 | single-strand DNA-binding protein |