Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cobi2g02462 | ATGGCTGCCACAAATGAATTCATGCATCACTTATCAATGGCTGCCTGTGAATGGTTCTTGATGTTGTTGATGTATATTGAAGCTGCATTGGGCTTCATTCTAACCAGATTTGCACATCAATGTGAATTGCAAACGCCTTGTTTATATTGCTTCCGGTTTGATCATGTTTTTGGTGACAGACCTGATTCTTATTTGACTCACTTTTGTAATAAACACCGTGCTGAGGTTTCGTGTTTGATAGCGTGTGATCTTCACCATAAACTCTCGGATGTAAGAGAAATGTGTGATGATTGTTTCATGTCAATCGCTAACGCAAAGCGTGACCAAGTTTCCAGGTTTAAACCTTTCTTGAACAAGAATTTTGAGCGCTCGCCTTCAAGTACCGGGTTGTGTTCGTGCTGTAAACGACCGTGGAAACCGAAACCGAGACCTCAAGTGAAGTTAGGGGTTAAGAAACTTTCCATGCATCCTCCGTTACCGGGCCGGTACCGCCGCCGGAGTCTTTTAAAAAAGGCTCGTGATAAGATCTCCGGCACCATGACTCCTTGTAGTGTCGAGAGTAGTATCCATGTGGACACTGACATTGACGCGTTATCCGATTCAGGCTGTGCTGATCTTAAGTTTAATTCGTGTTCTTCTGAATCTGGCGACTCATTTTATGAAATCGAGTGCGAAAATGATGGTTTTGAGGATTTTTCTTGTGTTATTATACATAAAGCAAAATCTTTTAACACAACCCGTACTAGCAAGAGTATAACGAGTCCATTATCTTCAACATCGAGTGGTTTAACCAAGCATGGTGTAGAACAGAACGGGTCTCCAGAATTCAATCTAGATTTGCATTCTGTTAACGATGACATAGAGCAAAACGGGTCTCCAGATTTCAATCAAGATTTGCATTCTGTTAACAATGACGTAGAACAAAACGGATCTCCAGGATTCAATCAAGATTTGCATTCTGTGGCATCGAGTTCTTCATCAGATAAACATGAAGGTTATGAATCACCGGGCAAACACAGTGTAAGTAATTTCAAGAATAACTATGACATAGAAAAGCTCAAACGACAGATGGAACACGATCAAGAACAGTTGCGGTTATTACACAGGGAATTAGAGGAAGAAAGAAACGCAGCTGCAATAGCTGCTGATGAGGCGATGGCCATGATTACAAGATTACAAGAAGAAAAATCGGCTTTGCATATGGAAGCGTTACAATATTTAAGAATGATGGATGAACAAGCAGAATATGATATGGAAGCTTTAGATAAAGCCAATGATCTTATCACTGAAAAAGATAAAGAAATTCAAGATATTGAAGCTGAGCTGGAGTTTTTCAGAAGCCGATACGATGATGAAACAGTTAATTTCAAAGAAAACCATATGGGAAATGGAGAAACTTTGAACTTGTTAGACTTGAGGGTTAGTAATAATAACCCGGTTTTGGATCTTGAAGATGAAAAGACTTATGTTTTACAGTCTTTATTAGAGTCGGAAAAGAAGCTTTCTAATGGTGATAAATCGTTACAGCAAAGTGAAATTGAGAATGAAGTATTGGATCTTAATGATTGGTTAGAAGCAGTTGAATCTGATCGGGATTTTCTTGAGCATGCATGTAACACAGTCCAGAGTCACGTGGGATTAGAGTTTATTCAAGAAATAGCTCGGCATTTGCATGATTTGAGGAGGGCTCGGTTTGATAGAAGATGCCAAACGGTTGATTGA | 1722 | 39.55 | MAATNEFMHHLSMAACEWFLMLLMYIEAALGFILTRFAHQCELQTPCLYCFRFDHVFGDRPDSYLTHFCNKHRAEVSCLIACDLHHKLSDVREMCDDCFMSIANAKRDQVSRFKPFLNKNFERSPSSTGLCSCCKRPWKPKPRPQVKLGVKKLSMHPPLPGRYRRRSLLKKARDKISGTMTPCSVESSIHVDTDIDALSDSGCADLKFNSCSSESGDSFYEIECENDGFEDFSCVIIHKAKSFNTTRTSKSITSPLSSTSSGLTKHGVEQNGSPEFNLDLHSVNDDIEQNGSPDFNQDLHSVNNDVEQNGSPGFNQDLHSVASSSSSDKHEGYESPGKHSVSNFKNNYDIEKLKRQMEHDQEQLRLLHRELEEERNAAAIAADEAMAMITRLQEEKSALHMEALQYLRMMDEQAEYDMEALDKANDLITEKDKEIQDIEAELEFFRSRYDDETVNFKENHMGNGETLNLLDLRVSNNNPVLDLEDEKTYVLQSLLESEKKLSNGDKSLQQSEIENEVLDLNDWLEAVESDRDFLEHACNTVQSHVGLEFIQEIARHLHDLRRARFDRRCQTVD | 573 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cobi2g02462 | 573 | Pfam | Zein-binding | 352 | 442 | IPR007656 | - | |
| Cobi2g02462 | 573 | Coils | Coil | 350 | 402 | - | - | |
| Cobi2g02462 | 573 | MobiDBLite | consensus disorder prediction | 247 | 344 | - | - | |
| Cobi2g02462 | 573 | ProSiteProfiles | GTD-binding domain profile. | 348 | 446 | IPR007656 | - | |
| Cobi2g02462 | 573 | Coils | Coil | 421 | 455 | - | - | |
| Cobi2g02462 | 573 | PANTHER | MYOSIN-BINDING PROTEIN 2 | 258 | 567 | IPR039306 | GO:0017022(InterPro) | |
| Cobi2g02462 | 573 | MobiDBLite | consensus disorder prediction | 247 | 330 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cobi2g02462 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cobi | Cobi-Chr1:81328530 | Cobi2g02462 | Cobi-Chr2:73870861 | dispersed | |
| Cobi | Cobi-Chr2:73870861 | Cobi4g00606 | Cobi-Chr4:5545247 | dispersed | |
| Cobi | Cobi-Chr2:73870861 | Cobi8g01351 | Cobi-Chr8:63754560 | transposed |