Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cobi3g02275 | ATGAAGTCATCATTTGGGAAAATTGGGCGTAAACTTACGATGCACAAGGAGGCGCGAGATCATCAGCCTTCTGTACGTTTAGATGAGCTTCATCAGGCTTCTAAGGATATGCAAGATATGAGAAACTGCTATGACGGCTTATTAGCTGCAGCTGCTGCAACCGCAAATAGTATATACGAATTTTCGGAGGCGCTAAATGAAATGGGGAATTGCTTGCTGGGGAAAACCACTGCTGCCTGTGATGCTGAAAGTGGAAGCGTGCTCTCAATGTTGGGGAAATTGCAATTGGAACTTGAGAAAATTGCCGATACTTACCGTTCTTATGTAATCGTGACAATCACCAATCCAGCGGAGTCTCTCCTTAGTGAGTTAGTTAAAGTGGAGGAAATGAAATTTCAATGTTCTGAAAAAAGAGAAGTTTATGATCACATGGTGGCTCAACATAGAGAGAAGGGTAAACTGAAAACCGGTAAACTTGAAAGCTCAATTGCACAAAAACTGCAAGAAGCTCAAGATGAATATGATGATGTGGCGAGACTATGTGTATTTAGGGCAAAATCACTTAAAGAAGGACAATGGCGCAGTCTTTTAACACAAGCTGCTCGCCATCATACCGCACAGTTGAATTTCTTTCGCAAGGGGCTTAAAGCGGTTGAAGCAGTTGAACCTTTTATAAGAAATGTTGCAGAAAAGCATCGAATTGATTGCCAACTCAGTGGGTCCCAGGAAAGTGAACCTATGAATGGACATGAAGGCACTAATGATGGAGAGTTGGGTTTTGATTATAAACAAAAGAAGCAAGGACTTGATGATGGCACCTTACCAAATCCAATGGAGGTGGACCAGGTAGATTTCCCGTTTATTCAAGCTTCAAATTTAGAAGATTTAGAGATAAATCAGAACCGACATAAAACAGAGCATCTTTTCGGTAGGCAAACTAGAGTTAGCAGCTACTCAGCTCCATTATACCCGGAGAAGATTAACACATCTGAAAAGCTTAAAGAAGCCCAACCCAGCCCAATATCTTATTCGTACGTCCTACCCCCACCTGTTGGAGACACCCGAAATCCAGTTTCAAAACCTCCTCCATCTATTTCTCATGCCAACCCGTTTCCAAATCTACAGCACGATAATACACCGACCGCTCCTTTGACCTCAAGAACCAAGTCAACAATTAATACTGGTAACATTATCACCCCATCAATCCAATTACCTGCTCCCACCGCAAGATTTTCATTCTCACAAGATAATTATAACAAAACCGATGGTAGTAAAGCAGACAGACGACAATCTTACTCGGGCCCGTTACCACCGAGCAAGCAGTTTTCTTTCAAAATGTCATCTAATAGTAGCGGGCCCATTACTTCAACCGAGCTTCCTTCTCGGGCCTCAATTTCTAAGCCTAATTTGTCAAGTAATACTTCTCCTAAAATAAGTGAGCTTCACGAGCTTCCTAGACCACCTTCTAAACCCGCTGCTATTTCGGGAGGTTTGAACCGACATTCAGCACCGTTACTTTCCAAAAATCAAGAAATTTCCCCGCCTAATAAACGTGCTATGCTAACATCAACTTGTGCATCACCTCTCCCGCTTCCGCCTACAGTTGTGAAATTCAACCCAACTAACAAAGTAGCCTCTTGTCTGGCCCCTGTTGAAGGTTGA | 1662 | 42.72 | MKSSFGKIGRKLTMHKEARDHQPSVRLDELHQASKDMQDMRNCYDGLLAAAAATANSIYEFSEALNEMGNCLLGKTTAACDAESGSVLSMLGKLQLELEKIADTYRSYVIVTITNPAESLLSELVKVEEMKFQCSEKREVYDHMVAQHREKGKLKTGKLESSIAQKLQEAQDEYDDVARLCVFRAKSLKEGQWRSLLTQAARHHTAQLNFFRKGLKAVEAVEPFIRNVAEKHRIDCQLSGSQESEPMNGHEGTNDGELGFDYKQKKQGLDDGTLPNPMEVDQVDFPFIQASNLEDLEINQNRHKTEHLFGRQTRVSSYSAPLYPEKINTSEKLKEAQPSPISYSYVLPPPVGDTRNPVSKPPPSISHANPFPNLQHDNTPTAPLTSRTKSTINTGNIITPSIQLPAPTARFSFSQDNYNKTDGSKADRRQSYSGPLPPSKQFSFKMSSNSSGPITSTELPSRASISKPNLSSNTSPKISELHELPRPPSKPAAISGGLNRHSAPLLSKNQEISPPNKRAMLTSTCASPLPLPPTVVKFNPTNKVASCLAPVEG | 553 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cobi3g02275 | 553 | MobiDBLite | consensus disorder prediction | 502 | 516 | - | - | |
| Cobi3g02275 | 553 | MobiDBLite | consensus disorder prediction | 434 | 479 | - | - | |
| Cobi3g02275 | 553 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
| Cobi3g02275 | 553 | CDD | BAR | 26 | 223 | - | - | |
| Cobi3g02275 | 553 | MobiDBLite | consensus disorder prediction | 369 | 420 | - | - | |
| Cobi3g02275 | 553 | PANTHER | HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE | 1 | 536 | IPR037488 | - | |
| Cobi3g02275 | 553 | Gene3D | Arfaptin homology (AH) domain-BAR domain | 16 | 246 | IPR027267 | - | |
| Cobi3g02275 | 553 | MobiDBLite | consensus disorder prediction | 352 | 516 | - | - | |
| Cobi3g02275 | 553 | MobiDBLite | consensus disorder prediction | 10 | 26 | - | - | |
| Cobi3g02275 | 553 | SUPERFAMILY | BAR-IMD domain-like | 28 | 226 | IPR027267 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cobi3g02275 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 70615 | Cobi1g03660 | Cobi3g02275 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cobi | Cobi-Chr3:70722210 | Cobi5g00802 | Cobi-Chr5:8558779 | dispersed | |
| Cobi | Cobi-Chr1:85201589 | Cobi3g02275 | Cobi-Chr3:70722210 | wgd |