Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cobi3g02278 | ATGGGGTGTGCGGTTTCTGTGTACAGAGTCGGAGGTAACAAGAAGCCGATGAAGATCCCTGTGGTAACCGTGTTCGCACCTTCACTTCGTGTTCCCGTCAACTCCAGCTTTCAAAAACATCTTAGAGGAATTGTCCCCAAGGATCTCACCGATCGCCTCACCTCCTTTCGGAATCAAATCGCTCTTCTCGCTCAACAAACTGATGTTTCAGCTATTCCGGAACTATTACGTTCGTTGGAGGATTACTTATCGCTCTTGGTTGGCCTCACTGATCAAGGGTTTCAAGATGCGATTGAATTCAAATGGAAAAGTTTAGACGAGGGACGACAGGACATCAGTGTTGCTGATTCATGGTTCGAATTACTATGTGTTGTTCATATGATGGGTATGCTGACATTAATGGAGGCAAATTCAAAACTGGTTCCTGATCAATATGTTTGTAGTGAAACAGTTGAATCTACAGATGATATCAGGTCAGCTGTTGACTTGTTGGTCAAAGCAGCAGGGTACCTGCAGTTCTGTCTTCATGAAATTCTAGTTCAAATTCCACCTGATATAAAGATGCAGCTGCCTGTCGATTTGCAGGAGAATCTACTCGAGGCTGCTTATATTCAAGCACTAGGGCAGGGAACAGAAATGCAACTTGCTTCGGCCGTTGACTGTAAAAACGCCACTTTATCTGTTAAAAGAAGACTCGCATGCGAACAATTAAGTTATTTCAGCCAGGCACACTACTGCTTATCGACATGTGACAAACTTAACGGATATGGAAAGAAACATCTTTCATTTATCAAATGGAAGTACCTTGAAGCAAAGGCTGCAGCATACTACTATCATGGTCTGATCACAGACAAGGGTACGGAACCATCCTGCCACATCAGTGCAGTGTGTTGTTTTCTTGCTGCAGAAGAGATATTAACCGAGAGCAAGAAGGCGTGCTTAAACTTTTGCTTAACGGCTCCCATAACAAGGGCTCCAACTGCATGGGGTGCTATGAAACATTTGAATAAGAAAATTCCTGAAATTGCAGCTAATAAGTCACAAATGTACGCCTACCTTTTAGAGGAAGAAAAGAGTCTTCAAGTGTTACCAGAACTACCTGAATTTGAGTTATCATTAAAAGCAGACGAATATAAATTGCCGAATAAAGATGCTGCATGGGAGTGTGAAAAATGGAAAATACCTACTCAAACACTTAAAACTCATTTAAAAGATGACGAAGAAGATGATAAATGA | 1236 | 41.83 | MGCAVSVYRVGGNKKPMKIPVVTVFAPSLRVPVNSSFQKHLRGIVPKDLTDRLTSFRNQIALLAQQTDVSAIPELLRSLEDYLSLLVGLTDQGFQDAIEFKWKSLDEGRQDISVADSWFELLCVVHMMGMLTLMEANSKLVPDQYVCSETVESTDDIRSAVDLLVKAAGYLQFCLHEILVQIPPDIKMQLPVDLQENLLEAAYIQALGQGTEMQLASAVDCKNATLSVKRRLACEQLSYFSQAHYCLSTCDKLNGYGKKHLSFIKWKYLEAKAAAYYYHGLITDKGTEPSCHISAVCCFLAAEEILTESKKACLNFCLTAPITRAPTAWGAMKHLNKKIPEIAANKSQMYAYLLEEEKSLQVLPELPEFELSLKADEYKLPNKDAAWECEKWKIPTQTLKTHLKDDEEDDK | 411 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cobi3g02278 | 411 | SMART | BRO1-2 | 23 | 399 | IPR004328 | - | |
| Cobi3g02278 | 411 | CDD | BRO1-Alix-like | 10 | 374 | - | - | |
| Cobi3g02278 | 411 | Pfam | BRO1-like domain | 50 | 309 | IPR004328 | - | |
| Cobi3g02278 | 411 | PANTHER | UNCHARACTERIZED | 14 | 400 | IPR038898 | - | |
| Cobi3g02278 | 411 | ProSiteProfiles | BRO1 domain profile. | 6 | 411 | IPR004328 | - | |
| Cobi3g02278 | 411 | Gene3D | alix-aip1 like domains | 33 | 394 | IPR038499 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cobi3g02278 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cobi | Cobi-Chr3:70776494 | Cobi8g00668 | Cobi-Chr8:40101524 | dispersed | |
| Cobi | Cobi-Chr3:70776494 | Cobi11g02282 | Cobi-Chr11:66438126 | transposed |