AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi4g02666 ATGATGACCACCACCGGCGGCGAGTCTAGGGTTTCCATTCCGACGAACGTCCGTAAGCTCATTCACCAACTCACCAAAACCCTAACCCACAAACACACCGATGACTTCCTCTACACCACGCTCACCGACTCCGCCATGAACCCTACCGAAGCCGCCCGGAGATTGAAGATGGTTCATGACATTCAAGAGATCGCCGGAAAACACAGCGTTGAGGATGTCTATACAATGCTTAAGGATTGTAATCTTGATGCTAATGAAGCTGCTCAACGGCTATTGTATATTGATACGTTTCACGTGGTTAAAAAGAAACATGACAGGAGAAAAACCATAAGCGGTGATGGTTTTCGAGAGAATATGCAGACACGGGGTAATCAATGGAGGGGAGATAAGGGCGGGCGAGGGACTTTCTACTCATCGAAAGTTTTTGAAGATGTTGGAGGTGGGAGGAATTTGAGTTCAGGGAAGGAATATGGTGCTACTAATCGCATCGAGAGGGCTTTGAGGCCGCCCTTGCAAGTCCAAACTGGAAACGAAAACAATGTAGTACATGTGTCAAATTCTCGTGCCAAGGCCAATGGTACACCAGCTCTATCTAATGGGAATCACAACCATAGACATGCATCCGAGTCACCTGCAGATGTCGCATCCTCTGGTTCAGATCATGCTATGGTTTCATCTCAGAACACAAAGCATATATGCGCTGTGGGTACAATAAAATGTGAGATTGTAAAACGTAGTGGTTCTAATGAAAATGCTAGAATTCCAGCTGGCACGAAATTAAGTGCTGATCAGTTAGGCACTGCTACCATACCTGTTGTCACAGAAACTGCGGATTCTGACCTAAAATCTGCTGCAGCTGAAAAGGATCAGATCTCGGAATCTTTGCAGCCTGTTTTGTTGTCAACCCCAGACAGTTCACAGGTTGTCAATCCTATTCAGGATAGTCAGCAGCCTGCTCGGTTATTAAATGAGCCTCTAAAAGTTTCTGAAGAAGAGTATGAATCGGTTATATCAACCCCAAAACGTGATGTGATGGTGGAAAAACCGGCTTTATCTTCTCACCAAGCTGTTATTTTCCCTGATCATCTACAAGTCCCTGAAAATTATAAATGCCAGTTCATATTTGGAAGTTTAGAGGCTACTGATGATGATTGCAAATCAATTTCCGTGACTGAGTCAACTCAGCAAAATGAAGCTGTAAAAGAACCTTCTTTGAGCAACGGAAACGCATCAGTAATAGCCCAAGAAAGTGAAATTCAAGATCGTGTTTTTGAAGATGTACTGCCTTCAGAAGATAATAATATCCCATCTGATTCTTCTGCTATAATACCCGAGCAGACAAAGGTGGATATAGCCCCCCCTCCCCCTTCAACTGGATTCCAGAATCTTCCGGTTCTTCCAACAACCAGGGACTATTATGGTTATATGCCACCTCTGATGGGCCCACATTTTGTACAACTTGATGTACCTGACCTACAGCAGAATGGGAACGCGCAAGCTGTAACTGCAGCGGGTCAACCGCCTGTAACACAACCTGCAATGGCGGGGCAGGGTTCTGTAGCATTATCTCCACCTTTGTTTCCTTATTTCAGACCATATCCAAACTACATTCCATATAACCCATATTTCCCACATATGTATTTGCCACAAACCGCTCATTTGTTGAACCATGGTGTATTCCCTCAGCCGCCGCCACCACCACCTGCCGCCAATGTCCACCATTTGCAGGCGGCAGCAGCTGCGGTGAAAACACCCACCAATTCTCAAAACAAACAAGAAAGTAATGAAGATGTTACGTCTGAAGCAAATGATGATGGTAGTGTTTCAACAGTTCAACAGACTCAACAGGTTGAAGATTTACAAGCTCGGGCTCATGCACCGGTTCACGATTTACATAATATGTTGCCAAATTATTTCTATACCTACCCTCAAGCTGCCTTTTCACACTTACAAGCTGCTGCGCTTTATCATTCTTTGACCGGTCAATCTACCATACCACCGCCACTCATGTATCATCAACCACCACCTACTGGTGCCACCGTTGAACCGCATCAACAACCACATGCACCACAGGTTATCCATCAAGACACGGCGCTAGTGAACACAGGGACCGGTTGA 2118 45.28 MMTTTGGESRVSIPTNVRKLIHQLTKTLTHKHTDDFLYTTLTDSAMNPTEAARRLKMVHDIQEIAGKHSVEDVYTMLKDCNLDANEAAQRLLYIDTFHVVKKKHDRRKTISGDGFRENMQTRGNQWRGDKGGRGTFYSSKVFEDVGGGRNLSSGKEYGATNRIERALRPPLQVQTGNENNVVHVSNSRAKANGTPALSNGNHNHRHASESPADVASSGSDHAMVSSQNTKHICAVGTIKCEIVKRSGSNENARIPAGTKLSADQLGTATIPVVTETADSDLKSAAAEKDQISESLQPVLLSTPDSSQVVNPIQDSQQPARLLNEPLKVSEEEYESVISTPKRDVMVEKPALSSHQAVIFPDHLQVPENYKCQFIFGSLEATDDDCKSISVTESTQQNEAVKEPSLSNGNASVIAQESEIQDRVFEDVLPSEDNNIPSDSSAIIPEQTKVDIAPPPPSTGFQNLPVLPTTRDYYGYMPPLMGPHFVQLDVPDLQQNGNAQAVTAAGQPPVTQPAMAGQGSVALSPPLFPYFRPYPNYIPYNPYFPHMYLPQTAHLLNHGVFPQPPPPPPAANVHHLQAAAAAVKTPTNSQNKQESNEDVTSEANDDGSVSTVQQTQQVEDLQARAHAPVHDLHNMLPNYFYTYPQAAFSHLQAAALYHSLTGQSTIPPPLMYHQPPPTGATVEPHQQPHAPQVIHQDTALVNTGTG 705
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi4g02666 705 MobiDBLite consensus disorder prediction 581 620 - -
Cobi4g02666 705 MobiDBLite consensus disorder prediction 580 622 - -
Cobi4g02666 705 MobiDBLite consensus disorder prediction 111 130 - -
Cobi4g02666 705 MobiDBLite consensus disorder prediction 190 223 - -
Cobi4g02666 705 Pfam GBF-interacting protein 1 N-terminal 56 108 IPR009719 -
Cobi4g02666 705 PANTHER FLOCCULATION PROTEIN (DUF1296) 493 691 IPR044277 GO:0051082(PANTHER)
Cobi4g02666 705 SUPERFAMILY UBA-like 51 109 IPR009060 GO:0005515(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi4g02666 - -