AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi4g02670 ATGAATCTTTGGAGAAAGGTAGAACGAGGGTGGGATTACAAAGTTGAAGGAAACAGTTTGGTGGCTTGTCTTTTGGAACAAATCTCCAAGGAAACGGTACCTCAAACTACTAGGAAGGCGATGAGAAATCTGGTGTTGAAGAGTCTACTTAGAAACCAAAGGAACTTAGTAGACCACCTCGTGGTTGTTAGCTTCTTATTTGCTTGTCAATGCGATTTGGCGAGCCCAAAACAGATCACAGTAACATCAACTACCGATGGAAACAAGACGACTCCATTAGCGAGTGAGTGTAATCGATCAATGGAAGGATCACAAGACATATTATTGAACTCACTAACAAAACTCGGAGTCCCTATCCCAAACGAAGCTTCTTCCGTTCAAGATCTGACGCCGGAAGCCTTCGTATCAATCTGTGCTCACTCGCTTCGTAAAATTTCCAACTCGGACTCACTTCCGGTCACTTTATCTCTGGACTCTATGGCCGATCGCTTCACTGTGTGTACCGATCTCGCAGCTTCTGTTAAAGACCTAGGTTATATCGGCGATATGAGCTTCCATAAGTTTCTGTATCCATCTGAAGAAGACATGTATAAGTTGATTAGATTTTTGGTTGGGAGGCTCTCTGAATCATCTCGAACTGCAGTATCACCAGAAACAGAGGATAATAAGGCCTCTGCAACAATAAATGTTGATAATCGGGAAATATCTATCACGGATGTTGCTGATGTGGAGCAAAATTTGCATACTAAAGTTGAAAACTTGAAACTGAGAACTGATGAAGTGGCATCACATTCAATTCAGTATGCTGAAGATGTTGTCACTGATAATGGTGACAGAAGAGGGAATTCAGAAACTGATAGTATGGAAGCTGGCAGAGGTTTAGCAGATGATACTCAGGAAGATGATCAACAAAAACTTGACCAGTCATCCCAGACGAATGATAACACAGAAATTCCAATAAATCAAGAAAATGTGCGTTCAGATGAAATGAAAACAAAATCATTGATGTTACAACAGTTAGAAGAGCAACATGAGTTGTTGAAAGCATCAATGAAAATGGCTTGTGATGAAGAAACTCCATTAGAATCCTACATTACACAGCTCAGCAAGCAAATAGATGCAAAGAGGCATAATCTAGCAGAAATGGAGTCAAAATGGAAAGCCTTGATAAATCCTTTACAAGAGAAGAAAAGAAACTATGAAGAAGCTTTATGTGCAAAACAACCAGAGCTTCAAGAAAAACATCATCAGTGGAAAAAACTTGAGCAGGATTTGGAGTCTACATTGTCTGAAACAAATCAAAGAGAAAAGGAACTTTCCAGTTTGTCAGCAGAAGTTGAGAAACTGCCCAAAATGGCAACTAGAAGATCTTACATTGAGCGGGTGAAAGAGATTACTAAAAACAGCCGAAAACAAGATATCGACATAGAGCGTATTTTAAAAGATACCCGAGATCTTCAATTGGAGAGCAACATGATTCAAGAACGCCTGCATCGAACTTATGCGGTGGTAGATGAAACACTTCTAAGGGAAGCAAGGAAGGATCAAGTAGGAGAGCAAGCTCACATTTTGCTGACTACCATACACGAGAGTTTTCAAGAAATTTCCGAAAAAATCCTTGCAACTGACAGAGCGCGTAGAGAACAAACAGATCTTGAAACTAAGCTTTCAAGTCTTGCTACCCGAAGTTTAAACATGGACAAACTACAAGCAGATCTTGATGCCATCAGGAAAGAAAACGAATACCTTGAATCCCATTTGGGTAATCCTCCTTAA 1776 40.09 MNLWRKVERGWDYKVEGNSLVACLLEQISKETVPQTTRKAMRNLVLKSLLRNQRNLVDHLVVVSFLFACQCDLASPKQITVTSTTDGNKTTPLASECNRSMEGSQDILLNSLTKLGVPIPNEASSVQDLTPEAFVSICAHSLRKISNSDSLPVTLSLDSMADRFTVCTDLAASVKDLGYIGDMSFHKFLYPSEEDMYKLIRFLVGRLSESSRTAVSPETEDNKASATINVDNREISITDVADVEQNLHTKVENLKLRTDEVASHSIQYAEDVVTDNGDRRGNSETDSMEAGRGLADDTQEDDQQKLDQSSQTNDNTEIPINQENVRSDEMKTKSLMLQQLEEQHELLKASMKMACDEETPLESYITQLSKQIDAKRHNLAEMESKWKALINPLQEKKRNYEEALCAKQPELQEKHHQWKKLEQDLESTLSETNQREKELSSLSAEVEKLPKMATRRSYIERVKEITKNSRKQDIDIERILKDTRDLQLESNMIQERLHRTYAVVDETLLREARKDQVGEQAHILLTTIHESFQEISEKILATDRARREQTDLETKLSSLATRSLNMDKLQADLDAIRKENEYLESHLGNPP 591
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi4g02670 591 PANTHER JM1 PROTEIN 306 587 IPR008530 GO:0097602(PANTHER)|GO:2000060(PANTHER)
Cobi4g02670 591 MobiDBLite consensus disorder prediction 267 328 - -
Cobi4g02670 591 Pfam CCDC22 protein coiled-coil region 207 561 IPR048348 -
Cobi4g02670 591 Coils Coil 330 357 - -
Cobi4g02670 591 MobiDBLite consensus disorder prediction 273 304 - -
Cobi4g02670 591 Coils Coil 566 586 - -
Cobi4g02670 591 Coils Coil 365 385 - -
Cobi4g02670 591 MobiDBLite consensus disorder prediction 305 323 - -
Cobi4g02670 591 Pfam CCDC22 protein N-terminal domain 101 208 IPR048349 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi4g02670 K23343 coiled-coil domain-containing protein 22