AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi4g02673 ATGGAGCTCGTCCCATATTCCGATCCCAACTCCTCTTCACCACCGTGGCAAGACATGTTCCGATCAGCCTCCACCCGCAAACCCGACCCATCTCCTCCACCCGAACCCAAACCCCAACCCACCATTGACCCAACTCCAACACCCGACCCCCACCTCCGTCTGGCACTCTACATAGCCATGGCTCACGCCGGCTTAGCTTTCGCCTTTTTCGTCCTCTTCGCACTCTCCAAATTACTCCAAGACTTCCTCCGCCCCATCCTCTGGGCTGTCCTATGCTCAATCCCCCTTAGAAGCATCCAACAAACCCTCGTTCTCTTCTGGACTACCCCTCTTCAATCCGGTCTCATCGAAACCGTATTCGCAGTACCCGTTTCGGTCTACAATGTCTTCTTAGCCACCCTTGTTGACATCAAACATGTAGTGCTTAAATTAACCCTTAGAAAGACTAGGAAATTAGGTGTTTCGGGTAAACGGGAACGAAGCGGGTTTTCGATATTGTTGAGATGGTTAGTGTCATTGTGGGTGTTTGTAATGGCTTATGAACAATTTGGTGTTGTTGGTGGTGTGGGTTTGTTAGGGTTGGGGTTTATGTTCACTTCTAGTAATGTGAAGTCCGCGGTTTCGTTTCGTGGTCGTGGTCGTGGTCGTGGTCGTGTTTGGACAGCGTTCATGACGAGAGGGGTTTTGAAACGATTGGAGACGATTGTTGCATTCGGGTTGATTTTTGGGATGATTGTGGGGTCGGTAACTGTGACCGTGTTTTTCTCGTACAAGATTGGGGTTGAAGGGAAGAACGTTGTTTATTCGATTAAGTCTCGTGTTGAGGAGAGTAATTATACGGAGAGGATTGGGTTGAAGCGGTGGATGGACGAGAATGATGTGCCGGGAATGGTGGATCGGTACACGGCTCAGTTTTATGAAACGGTGTATCAACAGATTGATGGTTTGGCTTTACAGTATAATGTGACGGAAATCGTTCGTGAAATGAAACAGTTGATCCCACACCCGGTAAACTCTTCGGTATCTTCGACTGCGTTAGCAACGACAAATCCGTACACTGAGAAGATATTAAGTTTGAAACGGATAGTTAGTAACCGAGAATGGTCAGCAATTTATCCGGAAGTCAACGCGATGTTAAACGAGGCGCGTATTAGCAAAGAGGATGTTATTGAGAAAGCTAAAGCGGTTGCATTTCAAGGGAAGGACATTATTCAACGCGTGCTGGCAAGTAGTAAGTCGGTTGTTGGTGGTAGCACGAAGCTCGTGTTCATAGTAATTGGATCGATAGTTTCCGGGGCTGCAGGTTTATTTAATTTTATATCGCAGTCGATGGTTTTCGTATGGGTTTTATACTCGTTGATAACGTCGGATTCGGGTGGGGTTACTGAACAAGTTATGTATTTGATTCCAATTTCAAGATCGACTAGAACGCGGTGCGTAGAGGTACTTGATAAAGCTATTTCGGGTGTACTTTTGGCTACGGTTGAGATTGCGTTTTTCCAAGGGTGTTTAACTTGGCTTTTGTTTAGATTGTTTAATATTCATTTCGTGTATACGTCGACGTTGGTTGCGTTTATTAACCCGTTGTTACCAATCTTTCCTTATTTTTTTTCAACCATCCCAGCAGCATTGCAACTAGTGCTTGAAGGTAGATATATAGTTGCTATTTGTTTGTCGGTTATTCATCTTGCGCTTTTAGACTATGGGACTGCTGAAATTCAAGAAGATATACCGGGTCATAGTGCGTATCTTACCGGGCTAAGCATTATTGGTGGAGTCGCGTTGTTCCCATCTGCTTTGGAGGGAGCAATACTGGGACCATTGATAACAACTGTTCTTATAGCTCTAAAGAATTTGTATATAGAATATGTTATGGATGAAGCAAAAGAAGAGAAACAAGAGTAA 1905 44.93 MELVPYSDPNSSSPPWQDMFRSASTRKPDPSPPPEPKPQPTIDPTPTPDPHLRLALYIAMAHAGLAFAFFVLFALSKLLQDFLRPILWAVLCSIPLRSIQQTLVLFWTTPLQSGLIETVFAVPVSVYNVFLATLVDIKHVVLKLTLRKTRKLGVSGKRERSGFSILLRWLVSLWVFVMAYEQFGVVGGVGLLGLGFMFTSSNVKSAVSFRGRGRGRGRVWTAFMTRGVLKRLETIVAFGLIFGMIVGSVTVTVFFSYKIGVEGKNVVYSIKSRVEESNYTERIGLKRWMDENDVPGMVDRYTAQFYETVYQQIDGLALQYNVTEIVREMKQLIPHPVNSSVSSTALATTNPYTEKILSLKRIVSNREWSAIYPEVNAMLNEARISKEDVIEKAKAVAFQGKDIIQRVLASSKSVVGGSTKLVFIVIGSIVSGAAGLFNFISQSMVFVWVLYSLITSDSGGVTEQVMYLIPISRSTRTRCVEVLDKAISGVLLATVEIAFFQGCLTWLLFRLFNIHFVYTSTLVAFINPLLPIFPYFFSTIPAALQLVLEGRYIVAICLSVIHLALLDYGTAEIQEDIPGHSAYLTGLSIIGGVALFPSALEGAILGPLITTVLIALKNLYIEYVMDEAKEEKQE 634
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi4g02673 634 MobiDBLite consensus disorder prediction 1 45 - -
Cobi4g02673 634 MobiDBLite consensus disorder prediction 27 45 - -
Cobi4g02673 634 PANTHER TRANSMEMBRANE PROTEIN 19 633 IPR002549 -
Cobi4g02673 634 MobiDBLite consensus disorder prediction 1 20 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi4g02673 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
71628 Cobi2g03764 Cobi4g02673
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cobi Cobi-Chr12:23129973 Cobi4g02673 Cobi-Chr4:71567183 dispersed
Cobi Cobi-Chr2:89652453 Cobi4g02673 Cobi-Chr4:71567183 wgd