AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi4g02683 ATGGCGATTTTCGCGGGAAAACTGAAAGCAATTGAGCTTCAGTCACGAGTCTTCTTGAAACCCTGGAAGGAGACGAAGATTACAGTTCAATGCTGTTCGAATACTGGTTTTCCAGTCAGGTACACTCCTAAGCGATCCTCTAGTTTCAGTAAACCTAACGAGCCTGCTTCGGTTCCGAAGAAACCCGATGAATTTGAATTGTGTCGATACGAAAATGATGATTCGGTGAATGTTAAGTTTTCGGATGATCGGGAGAGGTCCGGGATTGGATCGTATTTGGACGATAAGTCACCGGATTTTAAGTCGGGTAATTTAAGATCTAATGGAAAGAAAGTTCGAAATTTAGCTGTGAGATCGGAGGTGTTGGAGCATAATTATAAATGGAGATCTGCAGAATCAAATTCCGTGGAAGAATTTCATGAATTTGATGCACTGGAAGGCCCTGAGGATGCTTTAGATGAACTTGACTCTCATAATGGAGAATATGAGATCAAACATCTGTCAACTGAACCTAGTGAAAGTAAAGAAAAGGCTGAGAATACAGCAATTAGATTGCTTGCTGCAAGGGCATATACAACACTTGAGCTGAAGAAGAAATTATTAGGAAAGAAATTCTCCCCTGGAGTTATCAATGCTGTGATCTCCGACTTCCAAAATAGAGGGTTAATCAATGACTCAGTGTATGCTGAAGCGTTTTCTCGGTCAAGATGGTCTTCATCAAGCTGGGGTCCACGCAGAATCAAGCAAGCTCTGGCCAAAAAGGGCGTCAATGACATTGATGCACAAAAAGCAATAAAATTGGTTTTGGAAGACGGTGAACCTGTCGACGATGATCAAGTTTCAAGATTTGGATTATCAAAGGCCTCATTTGACCATCTATTTACACAAGCTTCAAAGCAATGGATTCGTGCTAAAGATCTTCCGAGTGAAAAGCAGAAATCAAGAATCATCACATGGCTTCAATACCGTGGTTTTAATTGGGGAGTTATTAACTTCATCTTAAGAAAGTTACAATCCGAGCATCCGCCTTAA 1032 40.99 MAIFAGKLKAIELQSRVFLKPWKETKITVQCCSNTGFPVRYTPKRSSSFSKPNEPASVPKKPDEFELCRYENDDSVNVKFSDDRERSGIGSYLDDKSPDFKSGNLRSNGKKVRNLAVRSEVLEHNYKWRSAESNSVEEFHEFDALEGPEDALDELDSHNGEYEIKHLSTEPSESKEKAENTAIRLLAARAYTTLELKKKLLGKKFSPGVINAVISDFQNRGLINDSVYAEAFSRSRWSSSSWGPRRIKQALAKKGVNDIDAQKAIKLVLEDGEPVDDDQVSRFGLSKASFDHLFTQASKQWIRAKDLPSEKQKSRIITWLQYRGFNWGVINFILRKLQSEHPP 343
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi4g02683 343 Hamap Regulatory protein RecX [recX]. 147 341 IPR003783 GO:0006282(InterPro)
Cobi4g02683 343 PANTHER REGULATORY PROTEIN RECX FAMILY PROTEIN 10 342 IPR003783 GO:0006282(InterPro)
Cobi4g02683 343 Gene3D - 224 267 IPR036388 -
Cobi4g02683 343 Pfam RecX, second three-helix domain 224 264 IPR053924 -
Cobi4g02683 343 Gene3D - 177 222 IPR036388 -
Cobi4g02683 343 Gene3D - 287 342 IPR036388 -
Cobi4g02683 343 Pfam RecX, first three-helix domain 180 215 IPR053926 -
Cobi4g02683 343 Pfam RecX, third three-helix domain 290 334 IPR053925 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi4g02683 K03565 regulatory protein