Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cobi4g02761 | ATGATTGATCACGGAAACAATAATGTATACGGAATGAGTCCAATGGAACATCCATCGGTCGATAACCGGCTCCCGCTTTCGAGGAAACGATCTCGGGATTTGTGCTCGTTCGATGATCCGTCGTTTCCGAATAATCAATTCGGTTATAAGAATGAAATCATTAACCGGAATGGGATCTTCACGTTTCTGGGGCATGATATCTCCATGCAGATCTATCAACAACAACTTGAAATCGATCACTTCATTTCTCAACATACAGAGAAGATGAGATGTGACATCGAATCAATTCAAAGAACAAACTCGAGCCGACTGATCGCAGTCGCAGAGGAAGGACTAAAGCGACTGCGATCAAAAGACGAGGAAATAACAAGCATCCGAAGATTAAACTACGCGTTATCCGAGAAGGTGAAGTCACTCACATTAGACAACCAAATGTGGCAACAAGAAGCACAATCAAACGAAGCAACGGCTAAGGTTCTCCAACATAACATCCAACAAGTTCTAACACAAAGTGTTGTTGATGACGTGGAATCATGTTGCGAGAGTAACGTTGAACAAGGGCGTAGGTTAGCAGAAGGTGGTGATGATGTGGAGGCGTACGGTAGAAGGTGGTGCAGAAATTGTGGGAAAGGTGAGTTGTGTGTGTTGGTGTTACCTTGTAGACATCTGTGTGTGTGTAGTGTGTGTGAATCCTCAATCAATGTCTGTCCCATCTGTAAATCCACAAAAAATGGCAGTGTGCATGTTAATATGAATGCATTTTGA | 765 | 43.01 | MIDHGNNNVYGMSPMEHPSVDNRLPLSRKRSRDLCSFDDPSFPNNQFGYKNEIINRNGIFTFLGHDISMQIYQQQLEIDHFISQHTEKMRCDIESIQRTNSSRLIAVAEEGLKRLRSKDEEITSIRRLNYALSEKVKSLTLDNQMWQQEAQSNEATAKVLQHNIQQVLTQSVVDDVESCCESNVEQGRRLAEGGDDVEAYGRRWCRNCGKGELCVLVLPCRHLCVCSVCESSINVCPICKSTKNGSVHVNMNAF | 254 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cobi4g02761 | 254 | CDD | mRING-HC-C3HC5-CGRF1-like | 205 | 240 | - | - | |
| Cobi4g02761 | 254 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Cobi4g02761 | 254 | ProSiteProfiles | Zinc finger RING-type profile. | 205 | 240 | IPR001841 | - | |
| Cobi4g02761 | 254 | Gene3D | Death Domain, Fas | 88 | 213 | IPR011029 | - | |
| Cobi4g02761 | 254 | Gene3D | - | 214 | 248 | - | - | |
| Cobi4g02761 | 254 | PANTHER | SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN | 27 | 251 | - | GO:0004842(PANTHER)|GO:0043067(PANTHER) | |
| Cobi4g02761 | 254 | Pfam | Zinc finger, C3HC4 type (RING finger) | 204 | 243 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cobi4g02761 | K19042 | E3 ubiquitin-protein ligase BOI and related proteins [EC:2.3.2.27] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 71750 | Cobi3g00764 | Cobi4g02761 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cobi | Cobi-Chr4:74884926 | Cobi6g02032 | Cobi-Chr6:16418167 | dispersed | |
| Cobi | Cobi-Chr4:74884926 | Cobi4g02762 | Cobi-Chr4:74907200 | tandem | |
| Cobi | Cobi-Chr12:22369369 | Cobi4g02761 | Cobi-Chr4:74884926 | wgd | |
| Cobi | Cobi-Chr3:8793025 | Cobi4g02761 | Cobi-Chr4:74884926 | wgd |