Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cobi4g02809 | ATGAATAGTAATCCTTCAACGCCGATGAACGCACACGCTCCGTCGTCAAGCTCCGGTGGCGCCGGGTCACCGGATTCAAATACTCCGAGGAGAAATTCGAAGCGACCTAAATATTCTAGGTTTACACAGCAAGAACTCCCAGCTTGCAAGCCAATCCTTACGCCAAAATGGGTGATTTCAGCATTCATGCTTGTGACAATTGTCTTCATACCTATAGGACTTACTTCCCTCCTTGCTTCTAATGATGTAATTGAAATTGTTGACCGCTACGATAATGCCTGCTTAACAGGCACAAAAAGTCAAAAGGTCCAATATATACAAAATTCCACCTCAGATAAAACCTGCACCAGAACCTTGACAGTCAAAAAGAGAATGAAGCAGCCTATATATGTCTATTATCAGCTCGACAATTTCTATCAGAATCATCGCAGGTATGTCAAGAGCCGAAGTGATACGCAACTGAGAAACCTTGGTGATGAGAACGACACAAGTACATGTAAGCCTGAAAATGAAGCAAATGGGATGTCAATAGTGCCATGTGGACTTGTGGCCTGGAGTTTGTTCAATGACACATATACTCTCTCCACTCGTAGCAACCGGTCATTAACCATAAACAAGCGGGAAATTTCATGGAAGAGTGACAGAGATGAAAAGTTTGGTAGTGATGTCTTCCCAAAAAATTTCCAAAACAGTAGCTTTATTGGTGGTGGAAGTCTCAATTCGTCTATCCCATTAAATCAACAAGAAGATCTTATTGTTTGGATGCGAACTGCTGCGCTTCCAACGTTTAGGAAACTTTATGGGAAAATTGAGCAGGATATTGAGGCTGGTGAAACAATAACTGTGGTATTGCAGAACCGTTACAACACTTACAGTTTCAGTGGCAAGAAGAAACTTGTGCTTTCAACTACCAGCTGGCTTGGTGGGAAAAATAACTTTATTGGCATTGCTTATCTGGCAGTTGGTGGCTTGTGCTTTTTACTAGCTACCACTTTCACTATCATATATTTTGTTAAGCCAAGGCATCTTGGAGATCCGAATTATTTGTCATGGAACCGGAACCCAGGTGGTCACTAA | 1077 | 41.97 | MNSNPSTPMNAHAPSSSSGGAGSPDSNTPRRNSKRPKYSRFTQQELPACKPILTPKWVISAFMLVTIVFIPIGLTSLLASNDVIEIVDRYDNACLTGTKSQKVQYIQNSTSDKTCTRTLTVKKRMKQPIYVYYQLDNFYQNHRRYVKSRSDTQLRNLGDENDTSTCKPENEANGMSIVPCGLVAWSLFNDTYTLSTRSNRSLTINKREISWKSDRDEKFGSDVFPKNFQNSSFIGGGSLNSSIPLNQQEDLIVWMRTAALPTFRKLYGKIEQDIEAGETITVVLQNRYNTYSFSGKKKLVLSTTSWLGGKNNFIGIAYLAVGGLCFLLATTFTIIYFVKPRHLGDPNYLSWNRNPGGH | 358 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cobi4g02809 | 358 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
| Cobi4g02809 | 358 | PIRSF | Lem3-Cdc50 | 7 | 354 | IPR005045 | GO:0016020(InterPro) | |
| Cobi4g02809 | 358 | PANTHER | CELL CYCLE CONTROL PROTEIN 50 | 29 | 350 | IPR005045 | GO:0005783(PANTHER)|GO:0005794(PANTHER)|GO:0005886(PANTHER)|GO:0016020(InterPro) | |
| Cobi4g02809 | 358 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - | |
| Cobi4g02809 | 358 | Pfam | LEM3 (ligand-effect modulator 3) family - CDC50 family | 77 | 341 | IPR005045 | GO:0016020(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cobi4g02809 | K26935 | cell cycle control protein 50 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 71745 | Cobi3g00743 | Cobi4g02809 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cobi | Cobi-Chr4:75739550 | Cobi8g00945 | Cobi-Chr8:54691409 | dispersed | |
| Cobi | Cobi-Chr9:49170737 | Cobi4g02809 | Cobi-Chr4:75739550 | transposed | |
| Cobi | Cobi-Chr12:22125349 | Cobi4g02809 | Cobi-Chr4:75739550 | wgd | |
| Cobi | Cobi-Chr3:8495308 | Cobi4g02809 | Cobi-Chr4:75739550 | wgd |