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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi4g02813 ATGGCCGGCGGAGGTGGGAAGACGGTGGTGCATCCGGCGGTAGAACCACTGTCGTACCTGATCGGAACATGGAGAGGTGAAGGAGAAGGTGGTTTCCCCACCATATCCTCCTTCGCGTACCGCGAGGAGCTCAATTTCACTCATCCTGGTAACAAGCCTGTAATAGCTTACTCTCAGAAGACATGGAAATTGAGTTCTGGAGAGCCAATGCATGCTGAGAGCGGTTACTGGAGGCCGAAACCTGATGGAACTATCGAGGTTGTCATTGCGCAGAGCACTGGTCTTGCTGAAGTTCAGAAAGGAACATATGACGCAGAAACGAAAGTGGTTAAGCTTCAAAGTGAGCTTGTTGGAAACGCATCAAAGGTTAAGGAGATAACTCGAGTTTTTACTCTGGTTGGTGAAGAATTATCATATGTGGTTGAGATGGCTACTGATATCACTAGTCTTCAACCGCATTTGAAAGCTTCTCTTAAGAAGCTCTAA 486 47.53 MAGGGGKTVVHPAVEPLSYLIGTWRGEGEGGFPTISSFAYREELNFTHPGNKPVIAYSQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLAEVQKGTYDAETKVVKLQSELVGNASKVKEITRVFTLVGEELSYVVEMATDITSLQPHLKASLKKL 161
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi4g02813 161 Pfam THAP4-like, heme-binding beta-barrel domain 14 160 IPR014878 -
Cobi4g02813 161 Gene3D - 9 161 IPR012674 -
Cobi4g02813 161 SUPERFAMILY Lipocalins 10 160 IPR012674 -
Cobi4g02813 161 PANTHER THAP4 PROTEIN 9 161 IPR045165 -
Cobi4g02813 161 CDD lipocalin-heme-bd-THAP4-like 14 160 IPR014878 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi4g02813 K23205 THAP domain-containing protein 4