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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi4g02919 ATGGTTTCGCCTGAATCCACCAATTGGATCTACGATTACGGTGGCTTAATTGACGATATTACAGTACCTGATAGTAATTTCATTGTTTCTGCTTCTGGCTTTACCTGGCCGATTCAATCCACCTTCAATGGCTCATCATCTAACCCTAGTGCTGATCTTGATGGCTCAATTGTGGATTCAGATGGACATAATAATGATTCTAGACCAAAGAAGCGGGGAAGGGGTGAATCTTGCAGCGGTACAAGTAGCAAAGCATGCAGAGAGAAGTTGAGGAGGGATAAGCTAAATGACAAGTTTGTTGAGCTGGCTTCAATTCTTGATCCGGGAAGGCCTCCTAAAATTGATAAAGCTGCTATTTTGGTTGACGCGGTCCGTATTGTGACTCAGTTAAGAAAAGAAGCCCAGAAGCTGAAAGACTCTAGTTTAGATCTTCAGGAGAAAATTAAGGAGCTGAAGGCTGAGAAGAATGAACTCCGTGATGAAAAACAAAGGTTGAAAATGGAGAAAGAGAAGCTTGAGCAACAAGTAAACTCAATGAACCCACAACCCACATTCATGGCTCCTCCACCTGCAATACCTGCCGCTTACGCACAAGGCCAAGTGGGTAATAAGTTGGTTCCAGTCATCAGTTACCCGGGAATGGGAATGGCCATGTGGCAATTCATGCCACCTGCTGCAGTCGACACCTCACAGGATCACGTCCTCCATCCACCAGTCGCTTAA 723 45.09 MVSPESTNWIYDYGGLIDDITVPDSNFIVSASGFTWPIQSTFNGSSSNPSADLDGSIVDSDGHNNDSRPKKRGRGESCSGTSSKACREKLRRDKLNDKFVELASILDPGRPPKIDKAAILVDAVRIVTQLRKEAQKLKDSSLDLQEKIKELKAEKNELRDEKQRLKMEKEKLEQQVNSMNPQPTFMAPPPAIPAAYAQGQVGNKLVPVISYPGMGMAMWQFMPPAAVDTSQDHVLHPPVA 240
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi4g02919 240 Pfam Helix-loop-helix DNA-binding domain 83 130 IPR011598 GO:0046983(InterPro)
Cobi4g02919 240 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 79 130 IPR011598 GO:0046983(InterPro)
Cobi4g02919 240 SMART finulus 85 136 IPR011598 GO:0046983(InterPro)
Cobi4g02919 240 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 81 148 IPR036638 GO:0046983(InterPro)
Cobi4g02919 240 FunFam Transcription factor bHLH34 70 128 - -
Cobi4g02919 240 CDD bHLH-AtILR3-like 84 159 - -
Cobi4g02919 240 Gene3D arf6 gtpase in complex with a specific effector, jip4 129 182 - -
Cobi4g02919 240 PANTHER BHLH TRANSCRIPTION FACTOR 7 240 IPR044818 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0006879(InterPro)|GO:0046983(InterPro)
Cobi4g02919 240 Gene3D - 67 128 IPR036638 GO:0046983(InterPro)
Cobi4g02919 240 MobiDBLite consensus disorder prediction 59 77 - -
Cobi4g02919 240 Coils Coil 127 182 - -
Cobi4g02919 240 MobiDBLite consensus disorder prediction 44 85 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi4g02919 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
71929 Cobi3g02664 Cobi4g02919
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1801290 Cobi Cobi4g02919 Cobi-Chr4:77766429 Cobi5g01057 Cobi-Chr5:12044972
1819386 Cobi Cobi1g03646 Cobi-Chr1:85115130 Cobi4g02919 Cobi-Chr4:77766429
1820884 Cobi Cobi3g02664 Cobi-Chr3:78864370 Cobi4g02919 Cobi-Chr4:77766429
1856009 Cobi Cobi4g02919 Cobi-Chr4:77766429 Cobi5g01429 Cobi-Chr5:21751444
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cobi2g00419 . 1 284 Basic Helix-Loop-Helix Transcription Factor gene family AT1G69010 53.0 5.40e-93 277.0
Cobi2g00429 WGDA 91 458 Basic Helix-Loop-Helix Transcription Factor gene family AT1G68920 49.747 8.51e-97 299.0
Cobi2g00462 ACH,WGDA 145 349 Basic Helix-Loop-Helix Transcription Factor gene family AT1G68810 64.623 3.04e-76 234.0
Cobi3g00356 ACH 3 517 Basic Helix-Loop-Helix Transcription Factor gene family AT1G64625 33.952 8.17e-77 249.0
Cobi3g00366 WGDA 60 585 Basic Helix-Loop-Helix Transcription Factor gene family AT4G17880 30.712 3.41e-67 223.0
Cobi3g00368 WGDA 128 421 Basic Helix-Loop-Helix Transcription Factor gene family AT4G00870 35.505 4.77e-46 159.0
Cobi3g00369 . 19 421 Basic Helix-Loop-Helix Transcription Factor gene family AT4G00870 32.697 6.74e-55 185.0
Cobi3g00916 ACH 56 454 Basic Helix-Loop-Helix Transcription Factor gene family AT3G20640 43.23 1.33e-66 218.0
Cobi3g01002 ACH 6 152 Basic Helix-Loop-Helix Transcription Factor gene family AT2G31280 33.333 2.47e-19 88.6
Cobi3g01428 ACH 1 328 Basic Helix-Loop-Helix Transcription Factor gene family AT4G37850 42.09 3.08e-61 196.0
Cobi1g03135 . 36 64 Basic Helix-Loop-Helix Transcription Factor gene family AT1G69010 75.862 7.46e-07 44.3
Cobi1g03185 . 8 466 Basic Helix-Loop-Helix Transcription Factor gene family AT4G16430 44.467 1.51e-124 369.0
Cobi1g03204 . 1 309 Basic Helix-Loop-Helix Transcription Factor gene family AT4G02590 66.667 1.73e-120 346.0
Cobi1g03288 . 16 98 Basic Helix-Loop-Helix Transcription Factor gene family AT2G47270 42.169 1.58e-16 68.6
Cobi1g03646 . 5 231 Basic Helix-Loop-Helix Transcription Factor gene family AT3G19860 51.101 9.75e-67 207.0
Cobi1g03816 ACH 14 92 Basic Helix-Loop-Helix Transcription Factor gene family AT5G39860 65.823 1.71e-34 112.0
Cobi1g03818 . 7 235 Basic Helix-Loop-Helix Transcription Factor gene family AT3G47640 34.483 1.05e-30 110.0
Cobi1g03910 ACH,WGDA 199 332 Basic Helix-Loop-Helix Transcription Factor gene family AT3G21330 61.481 6.15e-49 167.0
Cobi1g03973 ACH,WGDA 315 426 Basic Helix-Loop-Helix Transcription Factor gene family AT1G27660 51.754 5.30e-24 98.2
Cobi1g04030 . 2 170 Basic Helix-Loop-Helix Transcription Factor gene family AT5G51780 47.953 5.62e-40 134.0
Cobi1g04124 ACH 1 247 Basic Helix-Loop-Helix Transcription Factor gene family AT5G50915 46.0 8.76e-58 186.0
Cobi1g04296 ACH 1 267 Basic Helix-Loop-Helix Transcription Factor gene family AT5G62610 54.38 8.58e-78 235.0
Cobi1g04362 . 3 347 Basic Helix-Loop-Helix Transcription Factor gene family AT5G61270 36.785 2.10e-36 134.0
Cobi1g04462 ACH,WGDA 98 426 Basic Helix-Loop-Helix Transcription Factor gene family AT1G27660 38.261 1.22e-53 182.0
Cobi1g04559 ACH,WGDA 8 186 Basic Helix-Loop-Helix Transcription Factor gene family AT5G67060 58.115 4.83e-53 170.0
Cobi1g04563 . 196 264 Basic Helix-Loop-Helix Transcription Factor gene family AT4G36930 82.609 2.91e-33 123.0
Cobi1g04606 ACH 249 348 Basic Helix-Loop-Helix Transcription Factor gene family AT4G33880 79.245 1.80e-51 172.0
Cobi1g04649 . 25 253 Basic Helix-Loop-Helix Transcription Factor gene family AT1G35460 48.178 6.38e-62 192.0
Cobi1g04813 ACH,WGDA 155 351 Basic Helix-Loop-Helix Transcription Factor gene family AT5G65640 65.99 3.27e-82 251.0
Cobi1g04910 . 163 273 Basic Helix-Loop-Helix Transcription Factor gene family AT4G36930 72.072 1.81e-42 145.0
Cobi1g04914 ACH 4 190 Basic Helix-Loop-Helix Transcription Factor gene family AT5G67060 55.263 1.93e-45 148.0
Cobi2g03121 ACH 143 450 Basic Helix-Loop-Helix Transcription Factor gene family AT1G12860 53.501 2.78e-102 308.0
Cobi2g03096 ACH,WGDA 32 456 Basic Helix-Loop-Helix Transcription Factor gene family AT3G07340 40.281 4.92e-74 234.0
Cobi2g02929 ACH,WGDA 1 276 Basic Helix-Loop-Helix Transcription Factor gene family AT5G62610 53.763 6.36e-78 236.0
Cobi2g02919 ACH 1 92 Basic Helix-Loop-Helix Transcription Factor gene family AT3G47710 67.391 3.97e-38 121.0
Cobi2g02918 . 1 92 Basic Helix-Loop-Helix Transcription Factor gene family AT3G47710 65.957 2.80e-34 111.0
Cobi2g02914 . 24 232 Basic Helix-Loop-Helix Transcription Factor gene family AT3G47640 46.698 1.02e-50 163.0
Cobi2g02844 ACH 17 386 Basic Helix-Loop-Helix Transcription Factor gene family AT5G08130 38.032 1.91e-52 181.0
Cobi2g02842 . 1 622 Basic Helix-Loop-Helix Transcription Factor gene family AT1G32640 48.886 0.0 557.0
Cobi2g02776 ACH,WGDA 113 426 Basic Helix-Loop-Helix Transcription Factor gene family AT1G27660 43.373 8.60e-60 199.0
Cobi2g02721 . 150 323 Basic Helix-Loop-Helix Transcription Factor gene family AT2G14760 58.046 5.52e-58 189.0
Cobi2g02508 . 2 162 Basic Helix-Loop-Helix Transcription Factor gene family AT4G25400 44.242 2.01e-38 130.0
Cobi2g02488 ACH 366 716 Basic Helix-Loop-Helix Transcription Factor gene family AT2G31280 47.383 1.50e-85 277.0
Cobi2g01427 ACH,WGDA 4 363 Basic Helix-Loop-Helix Transcription Factor gene family AT5G53210 48.753 1.78e-92 277.0
Cobi1g00991 . 36 98 Basic Helix-Loop-Helix Transcription Factor gene family AT1G05710 71.429 2.97e-25 97.8
Cobi11g00017 ACH,WGDA 7 364 Basic Helix-Loop-Helix Transcription Factor gene family AT5G53210 49.315 1.92e-97 290.0
Cobi11g00065 . 5 72 Basic Helix-Loop-Helix Transcription Factor gene family AT4G25400 61.765 7.83e-21 81.6
Cobi11g00066 WGDA 3 159 Basic Helix-Loop-Helix Transcription Factor gene family AT5G51780 47.771 1.48e-38 131.0
Cobi11g00246 . 142 181 Basic Helix-Loop-Helix Transcription Factor gene family AT3G22100 50.0 6.87e-07 43.1
Cobi11g00567 ACH,WGDA 129 356 Basic Helix-Loop-Helix Transcription Factor gene family AT2G42280 46.053 1.42e-49 167.0
Cobi11g00744 ACH,WGDA 12 91 Basic Helix-Loop-Helix Transcription Factor gene family AT5G39860 66.25 3.00e-34 111.0
Cobi11g00838 ACH,WGDA 61 200 Basic Helix-Loop-Helix Transcription Factor gene family AT3G50330 60.135 7.04e-43 143.0
Cobi11g00894 ACH 136 327 Basic Helix-Loop-Helix Transcription Factor gene family AT4G37850 42.289 1.65e-36 132.0
Cobi11g00895 ACH 138 328 Basic Helix-Loop-Helix Transcription Factor gene family AT4G37850 42.424 3.39e-40 142.0
Cobi11g00896 ACH 125 315 Basic Helix-Loop-Helix Transcription Factor gene family AT2G22770 39.583 1.94e-34 125.0
Cobi11g00899 ACH 138 327 Basic Helix-Loop-Helix Transcription Factor gene family AT4G37850 41.919 6.77e-35 128.0
Cobi11g00903 WGDA 138 327 Basic Helix-Loop-Helix Transcription Factor gene family AT4G37850 41.791 4.50e-35 129.0
Cobi11g00905 . 162 298 Basic Helix-Loop-Helix Transcription Factor gene family AT2G22770 33.571 2.37e-15 69.3
Cobi11g00906 WGDA 132 320 Basic Helix-Loop-Helix Transcription Factor gene family AT4G37850 45.596 2.07e-42 147.0
Cobi11g01093 . 166 335 Basic Helix-Loop-Helix Transcription Factor gene family AT1G68810 43.82 1.14e-36 130.0
Cobi11g01314 . 25 401 Basic Helix-Loop-Helix Transcription Factor gene family AT3G24140 56.818 5.43e-131 380.0
Cobi11g01576 ACH 1 92 Basic Helix-Loop-Helix Transcription Factor gene family AT3G47710 70.652 9.52e-41 127.0
Cobi11g01708 . 142 219 Basic Helix-Loop-Helix Transcription Factor gene family AT3G22100 39.286 4.40e-11 58.9
Cobi11g01828 . 6 153 Basic Helix-Loop-Helix Transcription Factor gene family AT2G31280 29.412 8.57e-15 73.6
Cobi11g01935 . 9 187 Basic Helix-Loop-Helix Transcription Factor gene family AT4G20970 30.0 4.47e-18 76.6
Cobi11g02043 ACH 265 450 Basic Helix-Loop-Helix Transcription Factor gene family AT1G12860 45.161 8.39e-46 158.0
Cobi11g02102 ACH,WGDA 129 231 Basic Helix-Loop-Helix Transcription Factor gene family AT1G30670 56.311 3.16e-24 95.1
Cobi11g02441 ACH 6 152 Basic Helix-Loop-Helix Transcription Factor gene family AT2G31280 35.057 4.35e-22 95.5
Cobi11g02728 . 13 99 Basic Helix-Loop-Helix Transcription Factor gene family AT2G47270 42.857 1.53e-17 70.5
Cobi11g02799 . 101 301 Basic Helix-Loop-Helix Transcription Factor gene family AT1G49770 25.373 1.37e-13 64.7
Cobi11g02857 ACH 29 330 Basic Helix-Loop-Helix Transcription Factor gene family AT4G34530 39.42 1.93e-60 195.0
Cobi9g00761 . 10 135 Basic Helix-Loop-Helix Transcription Factor gene family AT1G05710 61.832 8.88e-55 167.0
Cobi9g00649 ACH,WGDA 1 456 Basic Helix-Loop-Helix Transcription Factor gene family AT3G07340 40.789 8.41e-91 282.0
Cobi9g00230 . 35 180 Basic Helix-Loop-Helix Transcription Factor gene family AT3G56770 47.973 2.28e-42 141.0
Cobi5g02910 ACH,WGDA 6 146 Basic Helix-Loop-Helix Transcription Factor gene family AT2G31280 34.211 2.54e-19 87.4
Cobi5g02897 . 1 91 Basic Helix-Loop-Helix Transcription Factor gene family AT3G47710 51.042 4.09e-25 88.6
Cobi5g02717 ACH,WGDA 72 365 Basic Helix-Loop-Helix Transcription Factor gene family AT1G68810 59.732 8.46e-103 304.0
Cobi6g02399 ACH 146 324 Basic Helix-Loop-Helix Transcription Factor gene family AT4G37850 43.915 1.16e-38 136.0
Cobi6g02398 ACH 137 324 Basic Helix-Loop-Helix Transcription Factor gene family AT4G37850 42.424 1.68e-41 144.0
Cobi6g02397 ACH 136 324 Basic Helix-Loop-Helix Transcription Factor gene family AT4G37850 36.816 6.87e-30 113.0
Cobi6g02396 ACH 124 324 Basic Helix-Loop-Helix Transcription Factor gene family AT4G37850 40.394 5.99e-41 142.0
Cobi6g02391 ACH,WGDA 155 351 Basic Helix-Loop-Helix Transcription Factor gene family AT5G65640 65.482 4.23e-81 248.0
Cobi6g02244 ACH,WGDA 95 186 Basic Helix-Loop-Helix Transcription Factor gene family AT5G67060 91.304 7.85e-47 153.0
Cobi6g02182 ACH,WGDA 297 426 Basic Helix-Loop-Helix Transcription Factor gene family AT1G27660 55.385 1.46e-43 153.0
Cobi6g01939 ACH 1 249 Basic Helix-Loop-Helix Transcription Factor gene family AT5G50915 43.182 2.25e-53 174.0
Cobi6g01808 ACH,WGDA 234 406 Basic Helix-Loop-Helix Transcription Factor gene family AT4G29100 46.369 2.55e-34 129.0
Cobi6g01769 ACH,WGDA 248 347 Basic Helix-Loop-Helix Transcription Factor gene family AT3G21330 79.208 9.31e-49 158.0
Cobi6g01338 . 449 625 Basic Helix-Loop-Helix Transcription Factor gene family AT2G27230 47.396 7.06e-53 189.0
Cobi6g01284 . 65 241 Basic Helix-Loop-Helix Transcription Factor gene family AT3G56970 43.684 2.94e-37 129.0
Cobi10g00125 . 11 592 Basic Helix-Loop-Helix Transcription Factor gene family AT1G63650 38.87 6.15e-122 369.0
Cobi10g00177 ACH,WGDA 3 526 Basic Helix-Loop-Helix Transcription Factor gene family AT1G64625 32.841 7.50e-81 263.0
Cobi10g00234 WGDA 22 587 Basic Helix-Loop-Helix Transcription Factor gene family AT4G17880 49.449 0.0 532.0
Cobi10g00240 WGDA 114 320 Basic Helix-Loop-Helix Transcription Factor gene family AT1G72210 58.685 1.14e-77 239.0
Cobi10g00474 ACH,WGDA 64 587 Basic Helix-Loop-Helix Transcription Factor gene family AT4G17880 30.55 3.64e-68 226.0
Cobi10g00493 WGDA 16 175 Basic Helix-Loop-Helix Transcription Factor gene family AT4G20970 27.381 1.32e-10 57.8
Cobi4g00786 ACH 5 624 Basic Helix-Loop-Helix Transcription Factor gene family AT2G27230 33.704 1.21e-87 281.0
Cobi5g00890 . 58 193 Basic Helix-Loop-Helix Transcription Factor gene family AT2G40200 41.912 4.34e-28 105.0
Cobi5g01057 . 1 234 Basic Helix-Loop-Helix Transcription Factor gene family AT5G54680 45.798 6.29e-57 178.0
Cobi5g01293 . 6 240 Basic Helix-Loop-Helix Transcription Factor gene family AT3G19860 56.723 1.34e-83 251.0
Cobi5g01429 . 7 234 Basic Helix-Loop-Helix Transcription Factor gene family AT5G54680 53.219 2.08e-77 231.0
Cobi5g01563 . 113 351 Basic Helix-Loop-Helix Transcription Factor gene family AT1G68810 34.091 1.01e-34 127.0
Cobi5g01644 . 6 188 Basic Helix-Loop-Helix Transcription Factor gene family AT4G20970 28.495 2.97e-15 68.9
Cobi2g00265 . 142 244 Basic Helix-Loop-Helix Transcription Factor gene family AT1G18400 74.757 6.70e-52 168.0
Cobi10g02227 ACH 15 151 Basic Helix-Loop-Helix Transcription Factor gene family AT2G43060 36.601 1.19e-19 79.0
Cobi10g02199 ACH 132 456 Basic Helix-Loop-Helix Transcription Factor gene family AT3G07340 45.181 6.09e-73 231.0
Cobi10g01352 WGDA 70 315 Basic Helix-Loop-Helix Transcription Factor gene family AT2G24260 59.449 2.34e-85 265.0
Cobi12g01779 ACH,WGDA 414 581 Basic Helix-Loop-Helix Transcription Factor gene family AT4G17880 45.882 5.51e-36 130.0
Cobi12g01778 WGDA 68 255 Basic Helix-Loop-Helix Transcription Factor gene family AT1G32640 26.596 7.29e-22 90.5
Cobi12g01493 WGDA 110 283 Basic Helix-Loop-Helix Transcription Factor gene family AT4G14410 60.674 2.63e-67 207.0
Cobi12g01399 . 63 264 Basic Helix-Loop-Helix Transcription Factor gene family AT1G32640 43.137 7.44e-45 163.0
Cobi12g01260 WGDA 48 217 Basic Helix-Loop-Helix Transcription Factor gene family AT3G06590 49.708 9.35e-44 145.0
Cobi12g00893 ACH,WGDA 134 356 Basic Helix-Loop-Helix Transcription Factor gene family AT2G42280 46.667 1.89e-51 171.0
Cobi12g00774 ACH,WGDA 55 456 Basic Helix-Loop-Helix Transcription Factor gene family AT3G07340 40.674 8.79e-82 257.0
Cobi12g00678 ACH,WGDA 5 363 Basic Helix-Loop-Helix Transcription Factor gene family AT5G53210 50.137 7.85e-93 278.0
Cobi12g00305 WGDA 118 456 Basic Helix-Loop-Helix Transcription Factor gene family AT1G68920 48.246 1.76e-83 259.0
Cobi12g00285 ACH,WGDA 148 354 Basic Helix-Loop-Helix Transcription Factor gene family AT1G68810 61.137 1.62e-73 226.0
Cobi12g00168 . 1 192 Basic Helix-Loop-Helix Transcription Factor gene family AT3G06120 65.625 6.78e-86 249.0
Cobi6g00042 . 449 621 Basic Helix-Loop-Helix Transcription Factor gene family AT2G27230 47.568 1.32e-51 185.0
Cobi6g00093 WGDA 1 241 Basic Helix-Loop-Helix Transcription Factor gene family AT3G56970 38.314 1.31e-37 130.0
Cobi6g00136 WGDA 19 327 Basic Helix-Loop-Helix Transcription Factor gene family AT2G42300 40.663 4.32e-63 200.0
Cobi6g00635 WGDA 101 313 Basic Helix-Loop-Helix Transcription Factor gene family AT2G28160 54.795 7.13e-72 221.0
Cobi6g00717 ACH,WGDA 56 436 Basic Helix-Loop-Helix Transcription Factor gene family AT3G07340 44.0 4.49e-84 264.0
Cobi6g00779 . 10 134 Basic Helix-Loop-Helix Transcription Factor gene family AT1G05710 62.308 3.02e-53 162.0
Cobi6g00833 ACH 1 427 Basic Helix-Loop-Helix Transcription Factor gene family AT2G31210 42.282 1.93e-92 283.0
Cobi6g01004 . 12 218 Basic Helix-Loop-Helix Transcription Factor gene family AT4G09820 59.817 1.29e-84 273.0
Cobi6g01122 ACH 12 383 Basic Helix-Loop-Helix Transcription Factor gene family AT2G20180 40.811 2.47e-68 222.0
Cobi6g01162 . 226 323 Basic Helix-Loop-Helix Transcription Factor gene family AT2G14760 81.633 1.53e-53 174.0
Cobi6g01173 . 138 256 Basic Helix-Loop-Helix Transcription Factor gene family AT3G19500 57.364 2.11e-40 139.0
Cobi1g01613 . 17 309 Basic Helix-Loop-Helix Transcription Factor gene family AT4G02590 50.949 8.61e-77 235.0
Cobi10g02931 ACH 47 206 Basic Helix-Loop-Helix Transcription Factor gene family AT3G17100 53.704 8.46e-49 156.0
Cobi2g00870 ACH 6 149 Basic Helix-Loop-Helix Transcription Factor gene family AT2G31280 34.031 2.27e-19 87.8
Cobi2g00854 ACH 13 436 Basic Helix-Loop-Helix Transcription Factor gene family AT1G10610 31.616 3.54e-63 206.0
Cobi6g03486 ACH 1 517 Basic Helix-Loop-Helix Transcription Factor gene family AT1G64625 35.888 3.70e-82 263.0
Cobi3g03464 ACH,WGDA 1 173 Basic Helix-Loop-Helix Transcription Factor gene family AT4G30410 39.884 4.44e-32 111.0
Cobi3g03440 ACH 1 239 Basic Helix-Loop-Helix Transcription Factor gene family AT5G57150 53.414 3.82e-82 244.0
Cobi3g02987 . 1 419 Basic Helix-Loop-Helix Transcription Factor gene family AT1G09530 40.421 6.12e-70 231.0
Cobi3g02964 . 9 535 Basic Helix-Loop-Helix Transcription Factor gene family AT2G16910 41.736 2.21e-122 371.0
Cobi3g02889 . 137 351 Basic Helix-Loop-Helix Transcription Factor gene family AT5G65640 57.339 1.34e-71 224.0
Cobi3g02856 . 65 306 Basic Helix-Loop-Helix Transcription Factor gene family AT5G50010 31.227 1.01e-26 104.0
Cobi3g02849 . 1 320 Basic Helix-Loop-Helix Transcription Factor gene family AT1G72210 46.291 5.05e-80 244.0
Cobi3g02664 ACH 1 234 Basic Helix-Loop-Helix Transcription Factor gene family AT5G54680 65.145 3.18e-102 294.0
Cobi3g02656 ACH,WGDA 56 454 Basic Helix-Loop-Helix Transcription Factor gene family AT3G20640 41.951 1.12e-64 212.0
Cobi3g02591 ACH 201 493 Basic Helix-Loop-Helix Transcription Factor gene family AT3G26744 59.248 1.19e-109 329.0
Cobi3g02590 ACH 92 223 Basic Helix-Loop-Helix Transcription Factor gene family AT5G50915 58.333 3.30e-46 154.0
Cobi3g02501 . 17 93 Basic Helix-Loop-Helix Transcription Factor gene family AT1G74500 71.429 1.69e-33 109.0
Cobi3g02493 WGDA 1 193 Basic Helix-Loop-Helix Transcription Factor gene family AT5G62610 43.523 1.01e-35 122.0
Cobi3g02284 . 127 494 Basic Helix-Loop-Helix Transcription Factor gene family AT3G26744 57.812 8.21e-129 380.0
Cobi3g01558 . 9 308 Basic Helix-Loop-Helix Transcription Factor gene family AT1G49770 33.544 2.35e-43 148.0
Cobi3g01557 . 7 276 Basic Helix-Loop-Helix Transcription Factor gene family AT1G49770 31.047 4.04e-32 119.0
Cobi5g00758 WGDA 14 358 Basic Helix-Loop-Helix Transcription Factor gene family AT2G42280 40.0 3.05e-50 171.0
Cobi5g00652 ACH,WGDA 143 424 Basic Helix-Loop-Helix Transcription Factor gene family AT2G31210 42.123 4.03e-61 196.0
Cobi5g00489 WGDA 8 582 Basic Helix-Loop-Helix Transcription Factor gene family AT1G01260 49.15 9.51e-176 506.0
Cobi5g00322 . 9 434 Basic Helix-Loop-Helix Transcription Factor gene family AT1G31050 31.568 2.19e-51 178.0
Cobi5g00232 ACH,WGDA 99 349 Basic Helix-Loop-Helix Transcription Factor gene family AT1G68810 65.354 9.76e-96 287.0
Cobi5g00197 . 96 221 Basic Helix-Loop-Helix Transcription Factor gene family AT1G25330 48.507 1.72e-32 116.0
Cobi5g00064 ACH,WGDA 6 146 Basic Helix-Loop-Helix Transcription Factor gene family AT2G31280 31.217 4.83e-18 83.2
Cobi4g00063 . 26 229 Basic Helix-Loop-Helix Transcription Factor gene family AT5G54680 53.883 1.07e-60 196.0
Cobi4g00074 . 15 203 Basic Helix-Loop-Helix Transcription Factor gene family AT4G21330 38.693 2.72e-37 127.0
Cobi4g00075 . 1 389 Basic Helix-Loop-Helix Transcription Factor gene family AT1G61660 34.975 3.91e-50 169.0
Cobih2tg0040l_1g00050 . 3 526 Basic Helix-Loop-Helix Transcription Factor gene family AT1G64625 33.111 3.59e-84 271.0
Cobih2tg0040l_1g00106 . 22 587 Basic Helix-Loop-Helix Transcription Factor gene family AT4G17880 48.983 0.0 530.0
Cobih2tg0040l_1g00112 . 114 320 Basic Helix-Loop-Helix Transcription Factor gene family AT1G72210 58.216 4.82e-77 238.0
Cobi1g01003 . 106 313 Basic Helix-Loop-Helix Transcription Factor gene family AT2G28160 53.67 2.36e-71 221.0
Cobi6g04015 . 1 317 Basic Helix-Loop-Helix Transcription Factor gene family AT1G72210 49.544 5.68e-86 259.0
Cobi6g04023 . 65 309 Basic Helix-Loop-Helix Transcription Factor gene family AT5G50010 33.808 5.13e-23 96.7
Cobih2tg0044l_1g00122 . 144 328 Basic Helix-Loop-Helix Transcription Factor gene family AT4G37850 47.312 4.89e-51 168.0
Cobih2tg0045l_1g00045 . 199 332 Basic Helix-Loop-Helix Transcription Factor gene family AT3G21330 61.481 6.15e-49 167.0
Cobi9g03305 ACH,WGDA 132 321 Basic Helix-Loop-Helix Transcription Factor gene family AT4G37850 42.347 3.12e-39 139.0
Cobi9g03304 ACH,WGDA 8 324 Basic Helix-Loop-Helix Transcription Factor gene family AT4G37850 33.819 8.98e-35 129.0
Cobi9g03234 ACH,WGDA 91 192 Basic Helix-Loop-Helix Transcription Factor gene family AT3G50330 80.392 2.90e-45 148.0
Cobi9g03150 . 95 151 Basic Helix-Loop-Helix Transcription Factor gene family AT2G43060 39.062 9.33e-06 40.4
Cobi9g03130 ACH,WGDA 14 88 Basic Helix-Loop-Helix Transcription Factor gene family AT5G39860 66.667 2.52e-31 105.0
Cobi8g02561 ACH 17 92 Basic Helix-Loop-Helix Transcription Factor gene family AT5G39860 67.532 1.68e-31 104.0
Cobi8g02509 . 8 269 Basic Helix-Loop-Helix Transcription Factor gene family AT1G69010 42.593 1.72e-52 172.0
Cobi1g00453 ACH 26 291 Basic Helix-Loop-Helix Transcription Factor gene family AT2G24260 48.544 1.04e-78 246.0
Cobi3g00032 . 11 466 Basic Helix-Loop-Helix Transcription Factor gene family AT5G56960 32.689 5.50e-53 184.0
Cobi9g00199 . 1 110 Basic Helix-Loop-Helix Transcription Factor gene family AT3G56980 38.393 3.51e-13 62.4
Cobi9g00197 WGDA 1 241 Basic Helix-Loop-Helix Transcription Factor gene family AT3G56970 39.474 2.77e-34 122.0
Cobi9g00120 WGDA 20 327 Basic Helix-Loop-Helix Transcription Factor gene family AT2G42300 45.679 3.94e-76 233.0
Cobi9g02973 ACH,WGDA 129 340 Basic Helix-Loop-Helix Transcription Factor gene family AT2G42280 42.478 6.67e-43 145.0
Cobi9g02645 . 155 255 Basic Helix-Loop-Helix Transcription Factor gene family AT3G19500 44.34 1.75e-17 77.8
Cobi2g03207 ACH,WGDA 4 356 Basic Helix-Loop-Helix Transcription Factor gene family AT2G42280 35.279 8.57e-53 177.0
Cobi10g02419 WGDA 110 315 Basic Helix-Loop-Helix Transcription Factor gene family AT2G28160 55.3 3.89e-70 218.0
Cobi4g03308 ACH 15 330 Basic Helix-Loop-Helix Transcription Factor gene family AT4G34530 38.824 1.48e-57 187.0
Cobi4g03439 ACH 144 328 Basic Helix-Loop-Helix Transcription Factor gene family AT4G37850 47.594 9.78e-51 167.0
Cobi7g03072 . 1 385 Basic Helix-Loop-Helix Transcription Factor gene family AT4G00050 49.769 2.19e-94 288.0
Cobi7g02460 . 94 223 Basic Helix-Loop-Helix Transcription Factor gene family AT1G25330 57.252 8.73e-46 151.0
Cobi7g02335 . 142 243 Basic Helix-Loop-Helix Transcription Factor gene family AT3G22100 41.739 6.45e-24 94.0
Cobi7g01991 . 142 219 Basic Helix-Loop-Helix Transcription Factor gene family AT3G22100 40.476 8.25e-13 62.4
Cobi7g01782 ACH,WGDA 30 173 Basic Helix-Loop-Helix Transcription Factor gene family AT4G30410 39.333 1.53e-22 86.7
Cobi7g01264 . 190 366 Basic Helix-Loop-Helix Transcription Factor gene family AT1G10120 63.102 3.06e-69 219.0
Cobi7g01136 . 201 270 Basic Helix-Loop-Helix Transcription Factor gene family AT2G42300 50.0 7.78e-12 59.3
Cobi7g01135 . 96 354 Basic Helix-Loop-Helix Transcription Factor gene family AT2G42280 43.165 5.39e-50 166.0
Cobi7g00854 ACH 18 154 Basic Helix-Loop-Helix Transcription Factor gene family AT2G43060 36.913 4.33e-20 79.7
Cobi7g00838 ACH 56 456 Basic Helix-Loop-Helix Transcription Factor gene family AT3G07340 42.857 6.41e-89 276.0
Cobi7g00787 ACH 12 382 Basic Helix-Loop-Helix Transcription Factor gene family AT2G20180 38.901 2.06e-61 206.0
Cobi7g00713 . 1 466 Basic Helix-Loop-Helix Transcription Factor gene family AT4G16430 46.169 1.45e-136 400.0
Cobi7g00642 . 118 256 Basic Helix-Loop-Helix Transcription Factor gene family AT4G30980 30.986 2.75e-16 75.5
Cobi7g00589 . 117 250 Basic Helix-Loop-Helix Transcription Factor gene family AT1G27740 63.571 2.64e-55 176.0
Cobi7g00555 ACH 101 294 Basic Helix-Loop-Helix Transcription Factor gene family AT2G22760 44.845 6.30e-43 147.0
Cobi7g00422 . 265 291 Basic Helix-Loop-Helix Transcription Factor gene family AT4G21340 70.37 4.02e-06 43.5
Cobi7g00339 . 1 419 Basic Helix-Loop-Helix Transcription Factor gene family AT1G09530 40.647 8.09e-70 229.0
Cobi1g02631 . 39 250 Basic Helix-Loop-Helix Transcription Factor gene family AT2G40200 45.833 7.91e-43 144.0
Cobi1g02656 ACH 180 342 Basic Helix-Loop-Helix Transcription Factor gene family AT5G65640 27.439 1.98e-11 58.9
Cobi1g02712 ACH 97 364 Basic Helix-Loop-Helix Transcription Factor gene family AT5G53210 51.866 6.17e-84 253.0
Cobi12g02476 ACH 1 175 Basic Helix-Loop-Helix Transcription Factor gene family AT4G30410 44.385 2.51e-34 118.0
Cobi4g01469 ACH,WGDA 74 305 Basic Helix-Loop-Helix Transcription Factor gene family AT4G30980 57.759 2.87e-71 223.0
Cobi8g01889 ACH 12 434 Basic Helix-Loop-Helix Transcription Factor gene family AT1G10610 33.412 1.07e-71 230.0
Cobi8g02088 WGDA 114 320 Basic Helix-Loop-Helix Transcription Factor gene family AT1G72210 54.751 8.09e-75 231.0
Cobi8g02097 ACH,WGDA 10 622 Basic Helix-Loop-Helix Transcription Factor gene family AT1G32640 48.908 0.0 560.0
Cobi8g02204 ACH,WGDA 6 524 Basic Helix-Loop-Helix Transcription Factor gene family AT1G64625 33.863 1.05e-85 276.0
Cobi8g02374 . 29 385 Basic Helix-Loop-Helix Transcription Factor gene family AT4G00050 39.295 3.77e-43 153.0
Cobi1g02454 . 1 317 Basic Helix-Loop-Helix Transcription Factor gene family AT1G72210 50.0 1.27e-85 258.0
Cobi1g02425 ACH,WGDA 207 334 Basic Helix-Loop-Helix Transcription Factor gene family AT3G21330 72.868 1.00e-54 181.0
Cobi1g02361 ACH,WGDA 135 238 Basic Helix-Loop-Helix Transcription Factor gene family AT1G30670 50.962 6.61e-23 93.2
Cobi1g02184 ACH 206 323 Basic Helix-Loop-Helix Transcription Factor gene family AT2G14760 73.729 8.27e-55 179.0
Cobi1g02087 ACH 220 426 Basic Helix-Loop-Helix Transcription Factor gene family AT1G27660 46.083 1.82e-45 159.0
Cobi1g02059 ACH 14 394 Basic Helix-Loop-Helix Transcription Factor gene family AT5G08130 43.21 3.23e-73 238.0
Cobi1g01909 . 47 199 Basic Helix-Loop-Helix Transcription Factor gene family AT3G56770 37.278 6.94e-24 94.7
Cobi6g03950 . 1 317 Basic Helix-Loop-Helix Transcription Factor gene family AT1G72210 48.048 7.05e-83 251.0
Cobi6g03828 ACH,WGDA 46 207 Basic Helix-Loop-Helix Transcription Factor gene family AT3G17100 52.761 2.65e-48 157.0
Cobi4g00282 ACH,WGDA 64 585 Basic Helix-Loop-Helix Transcription Factor gene family AT4G17880 29.104 2.58e-63 212.0
Cobi10g00849 . 12 241 Basic Helix-Loop-Helix Transcription Factor gene family AT5G57150 48.511 5.62e-68 208.0
Cobi1g00124 WGDA 101 283 Basic Helix-Loop-Helix Transcription Factor gene family AT4G14410 61.17 8.34e-69 211.0
Cobi5g02469 ACH,WGDA 2 551 Basic Helix-Loop-Helix Transcription Factor gene family AT2G46510 49.273 9.72e-174 499.0
Cobi5g02297 WGDA 1 424 Basic Helix-Loop-Helix Transcription Factor gene family AT2G31210 40.046 3.47e-78 245.0
Cobi5g02227 WGDA 15 354 Basic Helix-Loop-Helix Transcription Factor gene family AT2G42280 39.244 1.27e-50 171.0
Cobi5g02138 . 8 189 Basic Helix-Loop-Helix Transcription Factor gene family AT4G20970 41.848 3.93e-42 138.0
Cobi2g03872 WGDA 55 454 Basic Helix-Loop-Helix Transcription Factor gene family AT3G20640 38.642 1.27e-56 191.0
Cobi7g00010 . 206 388 Basic Helix-Loop-Helix Transcription Factor gene family AT1G61660 50.0 3.97e-50 169.0
Cobi4g00345 . 43 247 Basic Helix-Loop-Helix Transcription Factor gene family AT1G29950 39.32 6.14e-25 96.3
Cobi2g03895 ACH,WGDA 55 454 Basic Helix-Loop-Helix Transcription Factor gene family AT3G20640 38.208 1.13e-58 197.0
Cobih2tg0214l_1g00005 . 16 175 Basic Helix-Loop-Helix Transcription Factor gene family AT4G20970 28.485 2.03e-10 57.8
Cobih2tg0253l_1g00004 . 196 264 Basic Helix-Loop-Helix Transcription Factor gene family AT4G36930 82.609 3.19e-33 123.0
Cobi1g00996 . 30 98 Basic Helix-Loop-Helix Transcription Factor gene family AT1G05710 66.667 3.88e-25 97.8
Cobih2tg0450l_1g00002 . 129 321 Basic Helix-Loop-Helix Transcription Factor gene family AT4G37850 41.327 3.35e-36 130.0
Cobih2tg0450l_1g00004 . 138 327 Basic Helix-Loop-Helix Transcription Factor gene family AT4G37850 42.289 1.08e-35 130.0
Cobih2tg0569l_1g00006 . 142 244 Basic Helix-Loop-Helix Transcription Factor gene family AT1G18400 75.728 1.65e-52 170.0
Cobih2tg0669l_1g00001 . 188 343 Basic Helix-Loop-Helix Transcription Factor gene family AT2G42280 52.601 1.08e-43 149.0
Cobih2tg0786l_1g00002 . 17 309 Basic Helix-Loop-Helix Transcription Factor gene family AT4G02590 50.789 1.22e-76 234.0
Cobi9g01142 . 119 355 Basic Helix-Loop-Helix Transcription Factor gene family AT2G42280 45.059 2.55e-49 169.0
Cobi9g01464 . 1 632 Basic Helix-Loop-Helix Transcription Factor gene family AT2G27230 47.246 0.0 534.0
Cobi9g01596 . 55 401 Basic Helix-Loop-Helix Transcription Factor gene family AT3G24140 59.777 5.22e-134 388.0
Cobi9g02087 . 168 250 Basic Helix-Loop-Helix Transcription Factor gene family AT1G68810 59.77 1.44e-20 84.3
Cobi9g02208 ACH 177 254 Basic Helix-Loop-Helix Transcription Factor gene family AT2G18300 75.641 8.36e-39 134.0
Cobi9g02256 ACH,WGDA 13 216 Basic Helix-Loop-Helix Transcription Factor gene family AT5G53210 44.186 4.68e-37 141.0
Cobi9g02340 . 3 168 Basic Helix-Loop-Helix Transcription Factor gene family AT5G51780 34.857 9.60e-24 92.0
Cobi9g02341 WGDA 2 178 Basic Helix-Loop-Helix Transcription Factor gene family AT5G51790 39.665 4.16e-36 125.0
Cobi4g02919 ACH 1 234 Basic Helix-Loop-Helix Transcription Factor gene family AT5G54680 65.984 1.08e-102 296.0
Cobi4g01622 . 1 406 Basic Helix-Loop-Helix Transcription Factor gene family AT4G29100 43.349 1.61e-91 278.0
Cobi6g03007 . 4 327 Basic Helix-Loop-Helix Transcription Factor gene family AT4G37850 37.685 3.25e-52 173.0
Cobi6g02883 . 50 206 Basic Helix-Loop-Helix Transcription Factor gene family AT3G17100 43.125 7.45e-30 107.0
Cobi8g00310 . 18 186 Basic Helix-Loop-Helix Transcription Factor gene family AT4G20970 29.31 3.65e-06 43.5
Cobi8g00316 . 20 186 Basic Helix-Loop-Helix Transcription Factor gene family AT4G20970 29.07 4.70e-07 45.8
Cobi8g01188 . 57 293 Basic Helix-Loop-Helix Transcription Factor gene family AT1G66470 48.971 1.35e-61 196.0
Cobi8g01270 ACH 99 356 Basic Helix-Loop-Helix Transcription Factor gene family AT1G68810 66.667 8.66e-106 313.0
Cobi8g01424 . 1 91 Basic Helix-Loop-Helix Transcription Factor gene family AT3G47710 61.29 8.18e-34 110.0
Cobi8g01459 . 7 264 Basic Helix-Loop-Helix Transcription Factor gene family AT1G59640 56.296 2.40e-86 256.0
Cobi8g01484 . 83 149 Basic Helix-Loop-Helix Transcription Factor gene family AT2G43060 35.821 4.86e-07 43.1
Cobi8g01683 WGDA 11 171 Basic Helix-Loop-Helix Transcription Factor gene family AT4G20970 33.333 1.76e-14 67.4
leaf

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Cobi HLH 1.2e-08 CL0827 TF bHLH