Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cobi4g02988	ATGGCAAATTTGTTAGCTCAGTTACAGTCCATCAAGATCTCATGTGATGCCCTCATGATAGCCGTGAAAGATGTGAGTGATTTGTGGGGTGTAGTGAAGGACAGATTCGAGGAACGGCTTCCGATTCAAGACGCTATATTAAACAACAAGAACCGGTATCCGGTCACTATTGATAGCTTACAAGCTGAGTTTTTATTGACTACTGATTCAAGGATCAAAACCCGGGTCCCACAGGATCAACTCTACTTTTGTTTTCAAGAACCTTATGCCACTCTACTTCTTGTTGCATGTGAGGATCTAGACGAGTTCAAGACAGTGCTAAAACCGCGTCTGAAGTTATTTTTGCAAAATGAGGAGGAGTGGTTCATTGTGTTTGTGTCCAAAGCTAAATCCGACAAGGACCCCGTGAGCAAGATGGAAAAGAAGGTTTACGCCAGACTTGAAGTTGATTTCAATTCAAGAAGGAGAGAGAGGTGCTGCAAGTTTGACTTATTTGACACTGAAGCAACCTTTTGGGAAGATTTTGATCTCAAAATCATGGAGTGCATCCGAAACACTTTCGATAGGCGCATCCAGTTCTACGAGGACGAGATTCGTAAGGTCAACGAACAACGGTTATCCCCCACTTGGAGCTTTTTTGACTTTTTCATCCTCAAAGAAAGCCTAGCATTCATGTTAGAGATGGCTAATCTTCATGATGATTCGTTACGCGAATATGATCACATAGAGATATGTTACCTGGACACAGTTAAAAATGTAGACGATAATAGGGAATTTGGAGGAAAGGAACATGGAGACGATCAATCCGCGATACTAAGCCGTAACAACAAACAACTAACACAGATTGTTCAAGAAACCTCCTTTAGGGAATTTGAGTTCCATCAGTATCTGTTTGCCTGTCAAGCTAAGCTGTTGTTTGATCTACACCGTCCATTTGACGTTGCATCAAGAGGTTTCTCATTTATAGTCAGTTTCTCAGAAATTTTGGCCCGCCATGAGAGTAATTTGCCTTTCTGCTTGAGGGAAGTTTGGGTCCTAACTTCATGTTTGAGCTTGATCAATGCAACTGCTGACCATTATAGAGACGGACAAATAGCACCGGATGTAGAAAGAGAATATTACCGTATACGGGCTGAGTTATATACTCTATCCCGAGTTAAGCTCATGCGGCTTGCATACTTAATCGGGTTCGGGCCTAATATAGAAAGAAGTCCACTCAACAGTGCTTCACTTAGCATGTTACCTTGGCCTAAACCAGCAGCATGGCCTTCAGTTCCCTCTGATGCAGCATCTGAAGTTATTGAGAAAGAAAAGTTAATTCTTCAAGTTACTCCAAGAGCCAAGCACTTTGGTATTCAAAGTAAACAGTTGTCTCTTGAACCATCTCCTCTTCTAAAAACCGAGAGCTCGGTTGATACCAAGAAACTTGCAGAACTTTTTGTGGCATGTGAACACGCTCTACGTGCGACCATTACTGATCCTGATTTATGGAAATATTTATCATCTTTAGAGGAGTTTGAGAAAAAATATCTGGATCTATCAAAGGGAGCTGCAGATAACTTTTACCATGCATGGTGGAAAAGACATGGAGTCGTATTCGATGGCGAAATTGCGTCCGTTTATTTCAAACACAAGAACTATGAGCAGGCTGCAAGTTCATATGAAAAAGTGTGTGCTCTTTATTCTGGTGACGGTTGGCAAGACTTGCTAGCAGACGTGCTTCCAAATCTAGCCGAATGCCAGAACATATTAAACGATAAGCCCGGTTACTTATCATCATGTGTTAGATTACTTTCCTTGGATAAAAACTTGTTCTTGGTCAAAGAACGCCAAGTGTTTCAGTCAGAGTTAGTTAGTCTTGCACATACTGAAATGGTTGACTTGAGCCCGTTAGACATGTCATCGTTGATAACATATTCGGCTGACTTGGGCCCGCCTGTCGAGCTTTGTGACGGGGATCCGGGCATGTTGACTTTGACTTTATGTAGTGAGTTTCCTGATGATGTTACTCTTGAATCACTTAGTCTTACATTGACATCTACGCATAATGCGGATGAACGCGTTAAGGCTATTAAGAGCAGTGGTGTTACAGTATTGAATACGGGCCGGAATACGATTGCTCTTACGTTGCCTGCACAGAAACCGGGCTCGTATGTGTTGGGTGTTCTTACAGGGCAGATTGGTCATTTAAGATTCAGGTCTCATGGTTTCTCGAAAGGTGGGCCCGGACATAGTGGTGATATGGGTTTTGATAAGCCCGCTAAGCCTATATTGACGGTGTTCAAACCAAGATCCCTTGTGGATCTATATCCAGCAGTTTCATCCGCATTACTAATAAACAAGCCTCAATGGGTCGGGATCGTTATCAAGCCGTTAAACTACTCCCTCAAGGGAGCCCGTTTAAACATTGACGTGGGGCCCGCATTAAAGATCGAGGAATCACAAGCCATTGAAATTGAGAAACGTGTCGATAACGATAATAACATTTCCCAACTTAGTCTTACAAATGGTTGTATAGAGCTACCAGATTGGGCCAGCAGTATAACTACCATTTTATGGATTCCAGTCTGTGCCATTAGTGATGGGCTACCAAAAGGAACATCTGCAGGTGAATTTTCAACCCAAAGACCAAACATTGCTAATGGGCTGAGGACTTTAGCTCTAAAACTTGAATTTGGAGTGTCACATAATCAGATATTAAAAAGGACTATACCAGTTCTTTTCAACGACCCGTTCCACGTCAGCACACGGGTCACGGACCAGGGCAGTGATGGTTCCTTATTTTTACAGGTGATATTACAGTCACAAGTGAAGGCTACATTAACTATACATGATGTTTCATTAGATTTACAAGACGGGTTTTCTCACGCTGGACGAGGTGACGGGAGACCGACATCTGGCATGTTCCCGTTGGTTGTTCCTCCTACATCTAAATCTGGAATATTGTTTGGTATATCACTTGAAGCTACAACCAACGAAGGCAATGAAGATGAAGAGGTAGTGGTGCATCGTGACACAATAATAAATATAAAATACGAAATTAGCGGGGAAAGAAATCATGGATCTCATACCCCTATATCTCTAAAACCCGAAGGACCCGAAAAGGGTGACGGGTTTTTAACATTCAAAAATGGTCTCATTTTACAACGGCCCGTGCAAGAGCCGTTGTTAGCAGTCGCTTTTCTTCCTTTACCTTCGAACGGTCTTACCGTTGGTCAACTCGTCACATTCAAATGGAGAGTTGAAAGGTTAACCAGTTTTGACAAAACGGACGAATTATTATATGAAGTCAACGCAAACTCCAAGAACTGGATGTTTGCGGGAAGGAAACGAGGCCATGCCCCTCTCTCCTCAAAACAAGGTTCAAGAATTGAGATATCAATAATGTGTGTGCCACTAGTTGCTGGGCATGTACGACCTCCACAACTCCACTTGCCAAATGTCAACCGGGCCCACATATGTTGCAATCCGGCGGGCCCACATTTAGTGTGTGTATTGCCTCCACCTTTGAGCTCATCATTTTGCATCCCACATTGA	3537	42.78	MANLLAQLQSIKISCDALMIAVKDVSDLWGVVKDRFEERLPIQDAILNNKNRYPVTIDSLQAEFLLTTDSRIKTRVPQDQLYFCFQEPYATLLLVACEDLDEFKTVLKPRLKLFLQNEEEWFIVFVSKAKSDKDPVSKMEKKVYARLEVDFNSRRRERCCKFDLFDTEATFWEDFDLKIMECIRNTFDRRIQFYEDEIRKVNEQRLSPTWSFFDFFILKESLAFMLEMANLHDDSLREYDHIEICYLDTVKNVDDNREFGGKEHGDDQSAILSRNNKQLTQIVQETSFREFEFHQYLFACQAKLLFDLHRPFDVASRGFSFIVSFSEILARHESNLPFCLREVWVLTSCLSLINATADHYRDGQIAPDVEREYYRIRAELYTLSRVKLMRLAYLIGFGPNIERSPLNSASLSMLPWPKPAAWPSVPSDAASEVIEKEKLILQVTPRAKHFGIQSKQLSLEPSPLLKTESSVDTKKLAELFVACEHALRATITDPDLWKYLSSLEEFEKKYLDLSKGAADNFYHAWWKRHGVVFDGEIASVYFKHKNYEQAASSYEKVCALYSGDGWQDLLADVLPNLAECQNILNDKPGYLSSCVRLLSLDKNLFLVKERQVFQSELVSLAHTEMVDLSPLDMSSLITYSADLGPPVELCDGDPGMLTLTLCSEFPDDVTLESLSLTLTSTHNADERVKAIKSSGVTVLNTGRNTIALTLPAQKPGSYVLGVLTGQIGHLRFRSHGFSKGGPGHSGDMGFDKPAKPILTVFKPRSLVDLYPAVSSALLINKPQWVGIVIKPLNYSLKGARLNIDVGPALKIEESQAIEIEKRVDNDNNISQLSLTNGCIELPDWASSITTILWIPVCAISDGLPKGTSAGEFSTQRPNIANGLRTLALKLEFGVSHNQILKRTIPVLFNDPFHVSTRVTDQGSDGSLFLQVILQSQVKATLTIHDVSLDLQDGFSHAGRGDGRPTSGMFPLVVPPTSKSGILFGISLEATTNEGNEDEEVVVHRDTIINIKYEISGERNHGSHTPISLKPEGPEKGDGFLTFKNGLILQRPVQEPLLAVAFLPLPSNGLTVGQLVTFKWRVERLTSFDKTDELLYEVNANSKNWMFAGRKRGHAPLSSKQGSRIEISIMCVPLVAGHVRPPQLHLPNVNRAHICCNPAGPHLVCVLPPPLSSSFCIPH	1178

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cobi4g02988	1178	Pfam	Trafficking protein particle complex subunit 10, TRAPPC10	1076	1146	IPR022233	-
	Cobi4g02988	1178	Coils	Coil	184	204	-	-
	Cobi4g02988	1178	SUPERFAMILY	TPR-like	536	604	IPR011990	GO:0005515(InterPro)
	Cobi4g02988	1178	PANTHER	EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1-TMEM1	9	1177	IPR045126	GO:0006891(PANTHER)\|GO:0034498(PANTHER)\|GO:0048193(InterPro)\|GO:1990071(PANTHER)\|GO:1990071(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cobi4g02988	K20307	trafficking protein particle complex subunit 10

Event-related genes

Select	Gene_1	Gene_2	Event_name
	71794	Cobi3g00939	Cobi4g02988
	71923	Cobi3g02590	Cobi4g02988

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cobi	Cobi-Chr3:11931984	Cobi4g02988	Cobi-Chr4:78794990	wgd