Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cobi4g03001 | ATGGCATATCACTTGTTGGCACATGAAGTATCCGATCTTTGCCTCGGCAAGCCACCACTCACCTCCCTCCCTATCTCCGCCACCATCCACCACGCCTTAACCGCCCTTAAATCATCCGACGACACCCACATCAGCATCTGGACATGTGACCACTCTACCCCCGATAACTGCCGTTGCGTTGGCAAAATTTGCATGGTTGATATTATTTGCTACCTATGCAACCAAGACAACTTATCTTCACCTTCCAACGCGCTTAAAGCGCCTGTTTCGGTCTTGTTGTCGCGTCTTCCAGCCGCGGTTGTTCAACACGTCGAACCCTCGTACAGTTTGCTTGAAGCTATTGATCTTATCATCAATGGTGCCCAGAATCTCGTGGTGCCGATTAAGAATACAACTTCAAAAAGAAAACAACTCCGGCAACTACCGTCAATAGCTCCGACGACTCACGCCGGCGGCCGTGAATTCTGTTGGCTAACACAAGAAGATGTAATCAGATTCCTTCTCAGCTCAATCGGATTATTCTCTCCGACCGCCGCATATTCAATCGATTCACTCGGAATCATCACAACGAATATTCTCACAATCAATTACCACTCGCCGGCGTCGAAAGCACTCGACGCCATTTCAGCCTCTCTCGCCGACCAGACATCCGTCGCTGTCGTGGACGACGACGGAGTTTTGATCGGCGAAATCTCGCCGTTCACTTTGAACCATTGTGACGAGATGGTTGCGGCCGCAATCGCAACCTTATCCTCTGGTGACCTCCTGGCTTACATAGACTGTGGGGGGCCACCAGAGGATATTATAAGGATTGTGGAATCTAGGTTAAAAGAGAGGAATTTGTACGGATTGCTGGACGAGTTTTCTATTTACTCGTCTGGGATTCCGTACTGTAATTCCACATCTTCTTCTGACGAAGAAAATATGCTGTCACCAAGTACTGGTCGACCTGGACGGTACAATAGGTCAGACAGCTACTCCGCCAGGATAATGAGGAGGTCGGAAGCGATTGTCTGCCATCCTGGGAGCTCGTTGGTGGCGGTGATGATTCAAGCGATCGCGATGCGAGTGAATTGTGTTTGGGTGATTGAAGAGGATTGTAGTGTGGTTGGAGTAGTGAAATTTTCTAGCATGTTGAAAGTTTTTCAAGAACATTTGGAGAGCATGATTTACTAG | 1176 | 48.55 | MAYHLLAHEVSDLCLGKPPLTSLPISATIHHALTALKSSDDTHISIWTCDHSTPDNCRCVGKICMVDIICYLCNQDNLSSPSNALKAPVSVLLSRLPAAVVQHVEPSYSLLEAIDLIINGAQNLVVPIKNTTSKRKQLRQLPSIAPTTHAGGREFCWLTQEDVIRFLLSSIGLFSPTAAYSIDSLGIITTNILTINYHSPASKALDAISASLADQTSVAVVDDDGVLIGEISPFTLNHCDEMVAAAIATLSSGDLLAYIDCGGPPEDIIRIVESRLKERNLYGLLDEFSIYSSGIPYCNSTSSSDEENMLSPSTGRPGRYNRSDSYSARIMRRSEAIVCHPGSSLVAVMIQAIAMRVNCVWVIEEDCSVVGVVKFSSMLKVFQEHLESMIY | 391 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cobi4g03001 | 391 | MobiDBLite | consensus disorder prediction | 302 | 321 | - | - | |
| Cobi4g03001 | 391 | SUPERFAMILY | CBS-domain pair | 179 | 387 | IPR046342 | - | |
| Cobi4g03001 | 391 | SUPERFAMILY | CBS-domain pair | 4 | 168 | IPR046342 | - | |
| Cobi4g03001 | 391 | PANTHER | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT | 18 | 385 | IPR050511 | GO:0005634(PANTHER)|GO:0005737(PANTHER) | |
| Cobi4g03001 | 391 | Pfam | CBS domain | 187 | 232 | IPR000644 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cobi4g03001 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cobi | Cobi-Chr4:78911661 | Cobi8g02424 | Cobi-Chr8:74079290 | dispersed | |
| Cobi | Cobi-Chr2:90884149 | Cobi4g03001 | Cobi-Chr4:78911661 | wgd | |
| Cobi | Cobi-Chr2:90261595 | Cobi4g03001 | Cobi-Chr4:78911661 | wgd |