Gene detail

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cobi4g03006	ATGACCTCTAAATCGATCTGCACCGGATCTTCATCAGATCACATTTCCACCAAATCATTTATCCTGCATGTCGCCGCCGCCGCCGCTGTAGCCGTCGGTGCTCACGCTTACTTTTACTATTACCGCCGATCCGCCACCATGTTTCGGAGTCGGGTTGTCGGTATAATTCCGGCCCGGTTTGCTTCTTCCCGGTTTCAGGGCAAACCCCTCGTTCAGATCCTCGGCAAACCCATGATCCAGAGAACTTGGGAGAGAGCAAAGTTAGCATCAACATTGGACCGTGTCGTTGTGGCAACGGATGATGAAAAGATTGCAGAATGTTGTAGAGGATTTGGTGCTGATGTAATAATGACTGCCGAGTCATGCCGAAACGGCGCTGAGAGGTGTAGTGAAGCGCTTCAAAAGCTTGAGAAAAAGTATGATATTGTTGTCAATATTCAAGGAGACGAACCACTAATCGAACCTGAAATAATCGACGGGATCGTCAAATCTCTTCAGACCTCCCCGGATGCAGTTTTCAGCACAGCAGTAACATCTTTGAAACCAGAAGACGCGTTTGATCCGAATCGTGTGAAATGCGTGGTTGATAATCGTGGTTACGCAATCTACTTCTCTCGAGGGCTGATCCCTTTTAACAAGTCCGGGAAAGTCAATCCTGCGTTTCCTTACAATCTTCATCTAGGTATTCAGAGCTATGATTCCGAGTTTCTAAAGATATACCCTGATTTGACCCCAACTCCATTGCAACTGGAAGAAGATTTGGAACAGTTAAAAGTTCTTGAAAATGGTTACAAGATGAAGGTAATAAAAGTGGATCATGATGCGCATGGTGTCGATACGCCTGAAGATGTTGCCAAGATAGAAAGTTACATGCGTGAAAGGAACTTGTCTTAG	894	45.75	MTSKSICTGSSSDHISTKSFILHVAAAAAVAVGAHAYFYYYRRSATMFRSRVVGIIPARFASSRFQGKPLVQILGKPMIQRTWERAKLASTLDRVVVATDDEKIAECCRGFGADVIMTAESCRNGAERCSEALQKLEKKYDIVVNIQGDEPLIEPEIIDGIVKSLQTSPDAVFSTAVTSLKPEDAFDPNRVKCVVDNRGYAIYFSRGLIPFNKSGKVNPAFPYNLHLGIQSYDSEFLKIYPDLTPTPLQLEEDLEQLKVLENGYKMKVIKVDHDAHGVDTPEDVAKIESYMRERNLS	297

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cobi4g03006	297	FunFam	3-deoxy-manno-octulosonate cytidylyltransferase	50	292	-	-
	Cobi4g03006	297	NCBIfam	3-deoxy-manno-octulosonate cytidylyltransferase	54	284	IPR004528	GO:0008690(InterPro)
	Cobi4g03006	297	CDD	CMP-KDO-Synthetase	51	290	IPR004528	GO:0008690(InterPro)
	Cobi4g03006	297	Hamap	8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB].	50	292	IPR004528	GO:0008690(InterPro)
	Cobi4g03006	297	PANTHER	3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE	11	296	-	GO:0005829(PANTHER)\|GO:0008690(PANTHER)
	Cobi4g03006	297	SUPERFAMILY	Nucleotide-diphospho-sugar transferases	52	294	IPR029044	-
	Cobi4g03006	297	Coils	Coil	119	139	-	-
	Cobi4g03006	297	Pfam	Cytidylyltransferase	53	265	IPR003329	-
	Cobi4g03006	297	Gene3D	Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	41	292	IPR029044	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cobi4g03006	K00979	3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]