AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi4g03024 ATGTCAGTCCTGCTGGGTTCTCTTCATAAACATTTCATCAAACACCTGGCGTGCACTTCCTTCTCATCCATTCGCGCCACTCAAAACCTCACTTCCACCCGCCTTTTTAACATAATTCGTCCCATCACACATTACCCATCAACAACTTTCTTCAATCCAACCTCAGTTACTGCAGCATTTTCAACATCTTCAGCTTCTGAACCTCAGACCACTGGTGCATACTTATCCGTAGACATTCAAACCCCTCAAGATGTTGCTGATGTGTTTTCGGAAGCCCTGTTATGTTTCGGTGCGGTTTCAACGAGTGTGTTCGAACCGGATGTCTGCGACTCCAACGATGAGATCTCGATTGTTTCGATATTTTCCGTATCTGACGATGTGCATCAAAGTATTGCATTGGCAGCTGACTCAATTGGGTTGAAAGAAACACCTGTTTACAAAGTCACCACCGGCTACCAGTCCGATTGGATCGAAAATGCTCGGGAATCTTTCCATCCTATTGAAGTAACACAAGGACTTTGGATTGTGCCCGAGTGGTTAACTCCCCCTGACACCGAAGGCACAATTATAAGTTTAAACCCGGGGCTCGCTTTTGGAACCGGGGACCACCCGACAACCAAACTATGTCTATTATTATTGCAAGAATTAATCAAAGGCGGTGAAACGGTTTTGGATTATGGCACAGGTTCAGGGATTCTTGCAATTGCAGCACTAAAGTTTGGTGCAGCCTCAGCCGTTGGATTCGACATTGACCCTCAAGCGATAACAGCTTCACAACATAATGCTGATTTGAACGACATAGGACCCGACAAGTTGGAGCTGCAAGTTGTTCCTAGTAACATTAGTTCTATGTCAACCGATCAATGGCAATGGGTTATGAACAATGATGATAGTGTAACAACAGAGCATGCTGTTAAAAATTTTAATGAAAAAGAGAAGTACGACGTGGTTGTTGCAAATATACTTTTGAACCCGTTACTCGATTTGGCTGATCATATTGTTTCTTATGCTAAACCTGGTGGTGTAGTCGGTCTCTCGGGTATTATCTTGGAGCAGGTACCTACGGTTATTGACCGGTACTCGGATCTTTTGGAAGGAATTACCGTGTCACAAATTGATGATTGGGCTTGCATACGTGGCACGAAGAAGAAGACCGTGTAA 1161 44.19 MSVLLGSLHKHFIKHLACTSFSSIRATQNLTSTRLFNIIRPITHYPSTTFFNPTSVTAAFSTSSASEPQTTGAYLSVDIQTPQDVADVFSEALLCFGAVSTSVFEPDVCDSNDEISIVSIFSVSDDVHQSIALAADSIGLKETPVYKVTTGYQSDWIENARESFHPIEVTQGLWIVPEWLTPPDTEGTIISLNPGLAFGTGDHPTTKLCLLLLQELIKGGETVLDYGTGSGILAIAALKFGAASAVGFDIDPQAITASQHNADLNDIGPDKLELQVVPSNISSMSTDQWQWVMNNDDSVTTEHAVKNFNEKEKYDVVVANILLNPLLDLADHIVSYAKPGGVVGLSGIILEQVPTVIDRYSDLLEGITVSQIDDWACIRGTKKKTV 386
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi4g03024 386 CDD AdoMet-MTases 222 343 - -
Cobi4g03024 386 Gene3D Vaccinia Virus protein VP39 163 386 IPR029063 -
Cobi4g03024 386 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 133 378 IPR029063 -
Cobi4g03024 386 PANTHER ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE 74 383 IPR050078 GO:0005739(PANTHER)|GO:0008276(PANTHER)
Cobi4g03024 386 Hamap Ribosomal protein L11 methyltransferase [prmA]. 72 382 IPR004498 GO:0006479(InterPro)|GO:0008276(InterPro)
Cobi4g03024 386 Pfam Ribosomal protein L11 methyltransferase (PrmA) 74 383 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi4g03024 K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]