Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cobi4g03029 | ATGGCTGCTAATTCAGTTGAAGACACACATGTTCATATTTTCTCATCATCATCTGAGTTGCTTGAGAAGTTACATGAAAAGTGGAACTCAGTTAAGCAGGTGCCATATCCAGCAATGTATTCCAGTGTTTATGGTGGGATTATTCTCGACCCCGCGATGATGGTCATCCCGATCGATGATCATATGGTGCATCGAGGACATGGTGTGTTTGATACTGCCATTATCCTTGATGGATACCTCTACGAGCTCGATGGTCATCTCGACCGAATCTTATTATCAGCATCACGAGCCAAACTCTCGCCACCCTTCCCAAAATCAACTCTTCGATCGATCCTTATCCAGCTAACATCCGCATCAAAATGCACAAAAGGAACATTAAGATATTGGATAAGTGCAGGACCAGGAGACTTCTTACTTTCACCTTCCGGGTGTCCAACAACTGCATTCTACGCAGTCGTTATAGACGAAGAGTTCTCGCAATGTAAAGAAGGTGTAAAAGTAATAACCTCCACAGTCCCAATGAAAGTACCATTATTTGCAACAAGCAAGAATGTGAATTACCTCCCAAATGTTTTGTCAAAACTCGAAGCCGAAGAGAAAGGCGCATTTGCATCAATTTGGGTGGATGACGACGGGTATGTGGCCGAGGGCCCGAATGTGAATGTGGGTTTTGTGACGCGTGACAAGGAGCTTGTTTTGCCGTTTTTTGATAAGATTTTAAGCGGGTGTACTGCGAAACGGCTTCTTGAATTGGCGCCAAAGTTGGTTGAGAATGGGAGGTTAAAGAGTGTGACAGTTGGGAATATAACAGTTGAGGAAGCTAAAGAGGCTGCTGAAATGATGTATATTGGAAGTACACTTCCTGTGTTGCCTATTATTGAGTGGGATGAAAAGCCGATTGGCGACGGGAAAGTTGGGGAGTTGACAATGGCGTTATCGGACTTGGTTTGGGAAGATATGGTGGCTGGTCCGGAGACACACAGGATCAAGGTTCCTTATGCGTAA | 1005 | 44.58 | MAANSVEDTHVHIFSSSSELLEKLHEKWNSVKQVPYPAMYSSVYGGIILDPAMMVIPIDDHMVHRGHGVFDTAIILDGYLYELDGHLDRILLSASRAKLSPPFPKSTLRSILIQLTSASKCTKGTLRYWISAGPGDFLLSPSGCPTTAFYAVVIDEEFSQCKEGVKVITSTVPMKVPLFATSKNVNYLPNVLSKLEAEEKGAFASIWVDDDGYVAEGPNVNVGFVTRDKELVLPFFDKILSGCTAKRLLELAPKLVENGRLKSVTVGNITVEEAKEAAEMMYIGSTLPVLPIIEWDEKPIGDGKVGELTMALSDLVWEDMVAGPETHRIKVPYA | 334 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cobi4g03029 | 334 | PANTHER | AMINO-ACID AMINOTRANSFERASE | 30 | 325 | IPR050571 | GO:0019752(PANTHER) | |
| Cobi4g03029 | 334 | Gene3D | - | 6 | 154 | IPR043131 | - | |
| Cobi4g03029 | 334 | CDD | ADCL-like | 60 | 316 | IPR017824 | GO:0008696(InterPro)|GO:0030170(InterPro)|GO:0046656(InterPro) | |
| Cobi4g03029 | 334 | FunFam | D-amino-acid transaminase, chloroplastic | 16 | 154 | - | - | |
| Cobi4g03029 | 334 | Gene3D | - | 155 | 324 | IPR043132 | - | |
| Cobi4g03029 | 334 | Pfam | Amino-transferase class IV | 68 | 295 | IPR001544 | GO:0003824(InterPro) | |
| Cobi4g03029 | 334 | FunFam | D-alanine aminotransferase | 156 | 323 | - | - | |
| Cobi4g03029 | 334 | SUPERFAMILY | D-aminoacid aminotransferase-like PLP-dependent enzymes | 44 | 321 | IPR036038 | GO:0003824(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cobi4g03029 | K18482 | 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cobi | Cobi-Chr2:20309140 | Cobi4g03029 | Cobi-Chr4:79202931 | dispersed |