Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cobi4g03054	ATGCCTTCCACTTCAACTTTACTCATAATTTTGTTCTCTGTTCAACTAGTTGCCTCCATTTCAGCAGTCGTGCCTGCTTCACAAACATTCACTTACGTTAACCAAGGCGATTTCGGCGACTACGTAGTCGAATACGATGCAAATTACCGTGCTCTTCCCCCTTTTACCAACCCCTTCCAACTTTGCTTCTACAACACTACCCCTAATGCATTTACTCTAGCTCTCCGCATGGGCACCGTTCGATCCGAATCCCTCATGCGTTGGGTTTGGGAGGCTAACCGTGGGAACCCGGTTCGCGAAAATGCCACCCTCACATTCGGTCCAGATGGAAACCTAGTCTTGGCAGATGCCGATGGACGTGTTGCATGGCAAACGAATACCGCCAACAAAGGTGTGGTCGGTTTCCAACTGCTTCCAACCGGTAACATGGTTCTTCACGACGGTAAGGGTAATTTCATATGGCAAAGCTTTGACTCGCCAACCGATACTCTCTTGGTAGGTCAAACACTCATAGCTGGTGGTCCGAATAAGCTCGTGAGTCGCCTTTCCGAGACGAGTAATGTAGAAGGACCGTATAGTTTGGTGATGGAGCCCAAAGGGTTATCCTTGTATTACAAAAGTCCCAACTCGCCTAGACCAATGCTGTATTGGTCGTCGAGCGCGTGGTTTACCGTTGATCAAGGTAGTTTGGTTAACTTGACTCTTACGTCAGTCCCAGACACTGACGAGGGTATTCTATATTACTTAACGTTTGATTATTTTACCACAAAGTCATCTTCAAACCGTAACATGGCGTTTACACGCTACAACAACACGTTATCGTATCTTCGATTAGGGATAGACGGAAACCTTAGGTTCTACACGTATAACCCTAATGTGCAAGGTGTGGCGTGGGAGTTGGTGTACACGTTTCTTGATCGGGATTCGATGGAAGGCGAGTGTCAATTACCGGGACGATGCGGGAACTTTGGGTTATGTGAGGATAGTCAGTGTGTGGCGTGCCCGACACCGAATGGGTTAAGTGGTTGGAGCAAAGGATGTGATGTGAAACAGGTGACGTCTTGCAAAGCTAGTGACTTTGGTTACTACAAGCTTCAAGGGGTTGACCATTTCATGATCAAGTACACTAGGGGTGATGGGGCGACCAAACAAAGCGATTGCGAGAGCAAATGCACAAAGGATTGTAAGTGTATGGGGTACTTCTATCACACGGATGGTTCGAGGTGTTGGATTGCTTATGATTTGAAAACATTAACTAGAGTTGGGAACTCGACTCATTTGGTGTACATTAAAACACCCAACAAGTAG	1308	46.79	MPSTSTLLIILFSVQLVASISAVVPASQTFTYVNQGDFGDYVVEYDANYRALPPFTNPFQLCFYNTTPNAFTLALRMGTVRSESLMRWVWEANRGNPVRENATLTFGPDGNLVLADADGRVAWQTNTANKGVVGFQLLPTGNMVLHDGKGNFIWQSFDSPTDTLLVGQTLIAGGPNKLVSRLSETSNVEGPYSLVMEPKGLSLYYKSPNSPRPMLYWSSSAWFTVDQGSLVNLTLTSVPDTDEGILYYLTFDYFTTKSSSNRNMAFTRYNNTLSYLRLGIDGNLRFYTYNPNVQGVAWELVYTFLDRDSMEGECQLPGRCGNFGLCEDSQCVACPTPNGLSGWSKGCDVKQVTSCKASDFGYYKLQGVDHFMIKYTRGDGATKQSDCESKCTKDCKCMGYFYHTDGSRCWIAYDLKTLTRVGNSTHLVYIKTPNK	435

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cobi4g03054	435	CDD	PAN-AP-plant	354	433	-	-
	Cobi4g03054	435	Pfam	S-locus glycoprotein domain	228	339	IPR000858	GO:0048544(InterPro)
	Cobi4g03054	435	Pfam	PAN-like domain	378	411	IPR003609	-
	Cobi4g03054	435	FunFam	Os04g0303100 protein	79	213	-	-
	Cobi4g03054	435	CDD	B-lectin	43	160	IPR001480	-
	Cobi4g03054	435	SMART	blect-4	43	160	IPR001480	-
	Cobi4g03054	435	Gene3D	-	89	221	IPR036426	-
	Cobi4g03054	435	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5	56	432	IPR051343	-
	Cobi4g03054	435	SUPERFAMILY	alpha-D-mannose-specific plant lectins	68	218	IPR036426	-
	Cobi4g03054	435	Pfam	D-mannose binding lectin	89	170	IPR001480	-
	Cobi4g03054	435	ProSiteProfiles	PAN-Apple domain profile.	355	433	IPR003609	-
	Cobi4g03054	435	ProSiteProfiles	Bulb-type lectin domain profile.	15	158	IPR001480	-
	Cobi4g03054	435	PIRSF	SLG	1	435	IPR035446	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cobi4g03054	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cobi	Cobi-Chr4:79683555	Cobi4g03057	Cobi-Chr4:79709631	dispersed
	Cobi	Cobi-Chr4:79662961	Cobi4g03054	Cobi-Chr4:79683555	tandem
	Cobi	Cobi-Chr4:79683555	Cobi4g03055	Cobi-Chr4:79695113	tandem