Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cobi4g03058 | ATGGGCACCGTTCGATCCGAATCCCTCATGCGTTGGGTTTGGGAAGCCAACCGTGGGAACCCGGTTCGCGAAAATGCCACCCTCACATTCGGTCCAGATGGAAACCTAGTCTTGGCAGATGCCGATGGACGTGTTGCATGGCAAACGAATACCGCCAACAAAGGTGTGGTTGGTTTCCAAGTGCTTCCAACCGGTAACATGGTTCTTCACGACGGTAAGGGTAATTTCATATGGCAAAGCTTTGATTCGCCAACCGATACTCTCTTGGTCGGTCAAACACTCATAGCTGGTGGTCCGAATAAGCTCGTGAGTCGCCTTTCCGAGGCGAGTAATGTAGAAGGACCGTATAGTTTGGTGATGGAGCCCAAAGGGTTATCCTTGTATTACAAAACTCCCAACTCGCCTAGACCAATGCTGTATTAG | 423 | 50.35 | MGTVRSESLMRWVWEANRGNPVRENATLTFGPDGNLVLADADGRVAWQTNTANKGVVGFQVLPTGNMVLHDGKGNFIWQSFDSPTDTLLVGQTLIAGGPNKLVSRLSEASNVEGPYSLVMEPKGLSLYYKTPNSPRPMLY | 140 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cobi4g03058 | 140 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 | 11 | 131 | IPR051343 | - | |
| Cobi4g03058 | 140 | CDD | B-lectin | 1 | 84 | IPR001480 | - | |
| Cobi4g03058 | 140 | Pfam | D-mannose binding lectin | 13 | 95 | IPR001480 | - | |
| Cobi4g03058 | 140 | Gene3D | - | 11 | 135 | IPR036426 | - | |
| Cobi4g03058 | 140 | ProSiteProfiles | Bulb-type lectin domain profile. | 1 | 82 | IPR001480 | - | |
| Cobi4g03058 | 140 | SMART | blect-4 | 1 | 84 | IPR001480 | - | |
| Cobi4g03058 | 140 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 8 | 133 | IPR036426 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cobi4g03058 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cobi | Cobi-Chr4:79715802 | Cobi4g03060 | Cobi-Chr4:79723982 | dispersed | |
| Cobi | Cobi-Chr4:79709631 | Cobi4g03058 | Cobi-Chr4:79715802 | tandem |