Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cobi4g03136	ATGTCTTCTTCCAATTGCTCAATTTCATCTCCAATTTGGACTAATTCGAAAACCCAGTTCTCAATTTCATCTAAAAAGGGGGTTATCACATGCCCTAGAAAACCCAGATCAAATTCGACTAATTCTTCGAATTCGATCGTCTCAGCGCTTCAAACGCCTTCGATTCTTCATATTCCGAAGCAGTCGCCGGCGATTAAGACGTCTCCGGCGGTAATTGAACTTCCGGCGAGTTCTCCGGCGGGTGTGCAACAGAATTGGAATGTTTTACAGAAGCTTGCAGCAACGGCATTGGATGCAATTGAAGATGGGTTGAAAGCGCGGGAAAAGTTACATAAGTTGCCGAAAACGGCGGACCCTAACGTTCAAATCGCCGGAAATTTCGCGCCGGTGCCGGAGCAGCCTGTACGGAAAGACTTACCGGTGACCGGAACTATACCGGAGCATATTAACGGTGTTTATTTACGAAATGGAGCTAACCCGTTATTCGAACCGACGTCGGGTCATCATTTATTTGACGGTGACGGGATGATTTATTCGGTTAAATTCGATAACGGGTCGGTTAGTTACGCGTGTCGGTTTACGGAAACCCAACGGCTCGTTCAGGAACGAGCCATTGGGAAGCCCGTGTTCCCGAAGGCAATCGGGGAGTTACACGGGCATTCCGGGATTGCGAAATTATTATTATTTTACGCACGTGGGTTATGCGGGTTAATTGACCATACACAAGGGATCGGTGTGGCGAACGCGGGTTTGGTTTATTTTAACAACCGGTTGTTAGCGATGTCCGAGGACGATTTACCGTACCACGTGCGGGTCACGGGTTCGGGGGATTTAAAAACCGCGGGACGGTATGATTTCAACGGGCAGTTGAAATCTACAATGATTGCCCACCCGAAACTGGACCCAGTTTCGGGTGAGCTGTTTGCTTTAAGTTATGACGTCATTAAAAAACCCTATTTAAAATATTTTCGGTTTTCGCCCGACGGGAAGAAATCGAAGGACGTTGCGATCGATTTGGAGAAACCGACGATGGTGCATGATTTCGCAATCACCGAGAATTTCGTGGTGGTCCCGGACCACCAGGTGGTGTTTAAGATGTCGGAGATGGTTACGGGTGGATCGCCCGTGGTGTATGATAAAGAGAAGGTGTCGCGTTTCGGGGTACTTGATAAGTATGCCGAAAACGGGTCGGGTATAAGATGGGTCGAGGTTCCGGATTGTTTTTGTTTTCATTTATGGAACGCGTGGGAGGAACCCGAAACCGACGAGGTGGTTGTGATCGGGTCATGCATGACTCCGGCTGACTCAATTTTTAACGAATGTAACGAGGAATTAAAGAGTGTTTTGTCGGAGATTCGGTTAAATTTGAAAACCGGGAAGTCAACACGCCGGGCGATAATTTCGCCCGAAAACGACGTCAACTTGGAAGCTGGGATGGTTAATAAAAACCTCCTCGGTCGAAAATCAAAATACGCGTACCTCGCGATCGCTGAGCCGTGGCCCAAGGTCTCGGGGTTCGCGAAAGTTGATCTTTCTACTGGGGAAACTAAAAAGTTTATTTATGGAGAGCAAAAATATGGTGGTGAGCCACTTTTTCTTCCCCGGGTTGGAAATCCCGGGGAAGAAGTGGCAGAAGACGACGGCCATGTTTTGGCTTTCGTCCACGACGAAAAAACATGGAAATCAGAGCTACAAATAGTGAATGCAATGACGATGGAATTAGAGGCGACGGTGAAGCTTCCGTCCCGGGTTCCATACGGGTTTCACGGAACGTTCATAGCCGCCAAGGATTTGGCGACTCAAGCGTGA	1809	48.26	MSSSNCSISSPIWTNSKTQFSISSKKGVITCPRKPRSNSTNSSNSIVSALQTPSILHIPKQSPAIKTSPAVIELPASSPAGVQQNWNVLQKLAATALDAIEDGLKAREKLHKLPKTADPNVQIAGNFAPVPEQPVRKDLPVTGTIPEHINGVYLRNGANPLFEPTSGHHLFDGDGMIYSVKFDNGSVSYACRFTETQRLVQERAIGKPVFPKAIGELHGHSGIAKLLLFYARGLCGLIDHTQGIGVANAGLVYFNNRLLAMSEDDLPYHVRVTGSGDLKTAGRYDFNGQLKSTMIAHPKLDPVSGELFALSYDVIKKPYLKYFRFSPDGKKSKDVAIDLEKPTMVHDFAITENFVVVPDHQVVFKMSEMVTGGSPVVYDKEKVSRFGVLDKYAENGSGIRWVEVPDCFCFHLWNAWEEPETDEVVVIGSCMTPADSIFNECNEELKSVLSEIRLNLKTGKSTRRAIISPENDVNLEAGMVNKNLLGRKSKYAYLAIAEPWPKVSGFAKVDLSTGETKKFIYGEQKYGGEPLFLPRVGNPGEEVAEDDGHVLAFVHDEKTWKSELQIVNAMTMELEATVKLPSRVPYGFHGTFIAAKDLATQA	602

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cobi4g03136	602	PANTHER	BETA-CAROTENE DIOXYGENASE	111	593	IPR004294	GO:0009570(PANTHER)\|GO:0010436(PANTHER)\|GO:0016121(PANTHER)\|GO:0016702(InterPro)
	Cobi4g03136	602	MobiDBLite	consensus disorder prediction	26	45	-	-
	Cobi4g03136	602	Pfam	Retinal pigment epithelial membrane protein	127	593	IPR004294	GO:0016702(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cobi4g03136	K09840	9-cis-epoxycarotenoid dioxygenase [EC:1.13.11.51]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	71825	Cobi3g01141	Cobi4g03136

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cobi	Cobi-Chr4:80890698	Cobi7g02645	Cobi-Chr7:33582114	dispersed
	Cobi	Cobi-Chr11:72235450	Cobi4g03136	Cobi-Chr4:80890698	transposed
	Cobi	Cobi-Chr4:3936507	Cobi4g03136	Cobi-Chr4:80890698	transposed
	Cobi	Cobi-Chr4:4413599	Cobi4g03136	Cobi-Chr4:80890698	transposed
	Cobi	Cobi-Chr3:14470651	Cobi4g03136	Cobi-Chr4:80890698	wgd