AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi4g03146 ATGGCCAACAAGAACCAAAAGACCATTGATTTGGCTAGTGGAACTAGACCGTGTCATGAGGAGGATGGAGGCTCGGGCATCCGGATGGCGGAGATGCTTCTTAGGCTGTTTCCGGTGGGGCTGTGTGTGACGGCGTTAGTCGTTATGATTAAGGATTATGAGACTAATGATTATGGTTCTTTATCGTATTCCAAAATTACTGCTTTCAGGTTTTTGGTGCATGCCAATGGCATATTGGCCGGTTATTCGCTACTGTCGGCTGCTTTCACGGCAGTACCTCGCCCGATGACCATGCCTCGAGCCTGGACCTTCTTTCTACTTGACCAGGTTTCAACATACTTGATATTGGGTGCGGGTGCAGTGGCGACAGAGGTGGCGTATTTGGCATACAAAGGTGATGTGGCGGTGACGTGGAGTGAAGCGTGTGGGAGCTACGGCCACTTTTGCAAGCAAGCAACCGCGTCAATCATCATCACTTTTCTAGTAGTGATTTGCTACATTTTACTATCATTAATCTCGGCGTATAGGCTCTTTAGCAAGTATGATGCACCTGTCGGGTACTGTAACAAGGGAATCGAGATCGTTGATTTCGGGAGTTAG 600 48.33 MANKNQKTIDLASGTRPCHEEDGGSGIRMAEMLLRLFPVGLCVTALVVMIKDYETNDYGSLSYSKITAFRFLVHANGILAGYSLLSAAFTAVPRPMTMPRAWTFFLLDQVSTYLILGAGAVATEVAYLAYKGDVAVTWSEACGSYGHFCKQATASIIITFLVVICYILLSLISAYRLFSKYDAPVGYCNKGIEIVDFGS 199
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi4g03146 199 MobiDBLite consensus disorder prediction 1 21 - -
Cobi4g03146 199 NCBIfam plant integral membrane protein TIGR01569 33 176 IPR006459 -
Cobi4g03146 199 PANTHER CASP-LIKE PROTEIN 4A4 22 179 - -
Cobi4g03146 199 Pfam Casparian strip membrane protein domain 25 165 IPR006702 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi4g03146 - -