AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi4g03163 ATGCACAAAACGGCACAAGCGTGGTTCACCGGCGGTCCGAGCCAGAAGAACACCGATCTATCTCAACCGCCTTCTCTTCTCGCCGACTGGAACGCTTACGCCGCCGCATCTTCTCAAGATCTAGACTCCTCCGGTCTCGGTTTCGATATCGAAGCCGCTGTTCGATCAGCTAACGATAAGGTTTCCGGCACGTTTAATGTAGTTTCAAAGGGAGTTAGGGACATACCTGGAAACTTTCATTCTGCAACAAGCAATGTGCCAACTGGAAAATCTCTTGTGACATTTGGAATGCTTCTTGCTGTTGGTGTGTTTCTTGTGTTCATTGCTGTCACTGTGTTTCTACCAGTCATGGTGATTGTGCCTCAGAAGTTTGCCATATGTTTCACTATTGGTTGTGCCCTTATAATTGCTTCATTTTTTGCTCTCAAAGGATATAGAACTCAGTTTGCACATATGACATCTAAAGAGAGACTTCCAATTACATTGGGCTTTATTGGCAGCATGGTGGGCACCATTTATGTTTCAATGGTGCTTCACAGTTATCTTCTTTCTGTATTCTTTTCTTTGTTACAGGTCATCTCATTGTCTTACTATGCAATTTCTTACTTTCCTGGTGGATCGGCTGGCTTACAATTCTTCACCTCTGCTATTACTTCTTCGATTCTGAGATGCTTTGGGAGGTGA 684 44.01 MHKTAQAWFTGGPSQKNTDLSQPPSLLADWNAYAAASSQDLDSSGLGFDIEAAVRSANDKVSGTFNVVSKGVRDIPGNFHSATSNVPTGKSLVTFGMLLAVGVFLVFIAVTVFLPVMVIVPQKFAICFTIGCALIIASFFALKGYRTQFAHMTSKERLPITLGFIGSMVGTIYVSMVLHSYLLSVFFSLLQVISLSYYAISYFPGGSAGLQFFTSAITSSILRCFGR 227
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi4g03163 227 MobiDBLite consensus disorder prediction 1 21 - -
Cobi4g03163 227 Pfam Got1-Sft2-like family 92 204 IPR007305 GO:0016192(InterPro)
Cobi4g03163 227 PANTHER UNCHARACTERIZED 1 218 IPR011691 GO:0016020(InterPro)|GO:0016192(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi4g03163 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cobi Cobi-Chr4:81185069 Cobi7g01729 Cobi-Chr7:14408246 dispersed