Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cobi4g03171	ATGGTGGAAGCTTCCACAACAATCTTCCACACCACACTCCTTCCTTCACTATCACCCTTAACCACACGCCCCTCTCTATCACTCTCCATTCGAAGAACAACCTCAATCGTCCGATGCACCATCTCCACTACCTCCGATACGTCCAAGGCGCCTGCGGCGATCCCGTGGGGCTGCGAAATCGATTCGGTGGATAACGCGGCTGCTTTGCAGAAGTGGTTGACGATGTCTGGATTGCCGGATCAGAAAATGAGTTTGCAGAAGGTTGATGTGGGAGAAAGAGGGTTGGTGGCGGATAATAATATTAGGAAGGGGGAGAAGCTGTTGTTTGTGCCTCCGCCGCTCGTTATTTCGGCTGATTCGGAGTGGAGTTTTCCGGAAGCAGGTGAAGTATTGAAGAGATATAATGTACCAGATTGGCCATTAATTGCAACTTACTTAATCAGTGAAGCAAGTCTTATGGAATCATCTAGATGGAGCAGTTATATATCAGCTTTACCAAGACAACCTTACTCACTTTTATACTGGACGCGTGCAGAATTAGATCGGTATTTGGAAGCATCGCAGATTAGAGAACGCGCGATCGAAAGGATCAATAATGTTACCGGAACATACAATGACTTGAGAGCAAGAATATTCTCCAAGCATCCTAATTTATTTCCTGAAGAGGTATTCAATATGGAAACATTTAGATGGTCATTTGGGATACTTTTTTCACGTTTGGTTCGATTACCCTCGTTGGATGGAAGGGTTGCCTTAGTACCTTGGGCAGATATGCTTAACCATAGTTGTGATGTGGAAACTTTTTTAGATTATGATAAATCAACGAAGGGAGTTGTTTTTACAACCGACCGCGCTTACCAGCCAGGTGAGCAGGTGTTTATTTCGTATGGCAGGAAGTCTAATGGAGAGCTCTTGCTTTCATACGGGTTTGTTCCAAGGCAAGGGACAAACCCGCGTGACTCGGTTGAGTTGCCACTTATGCTTAAAAAATCTGATAAATGCTATGAACAAAAGGTGGAAGCCTTGAAGAAGCATGGGCTGTCAGCTTCACAGTGTTTTCCTTTACAAGTTACGGGTTGGCCGTTGGAGCTAATAGCATATGCATATTTAGCTGTCAGTCCCCCTAGTATGAGTGCAAAGTTTGAAGAGATGGCATCTGCAGCATCAAATAAGAACAACAGCAATAAGGAAATTAAATATCCTGAATTAGAGGAAGAGGCATTGCAATTTATACTGGATAGCTGTGAATCCAGCATATCAAAGTATACCAAGTTCCTTCAGGCAAGTGGGTCGATGGATTTGGACATAACATCTCCAAAGCAGCTGAACCGTAAAGTCTTCCTCAAACAGTTAGCCGTCGACTTGTGCAATAGTGAACAACGGATTCTCTTCCGTGCCCAATATATATTAAGGAGAAAGTTAAGGGATATGAGGAGAGGTGAACTGAAGGCCCTAAAACTGTTTGATAGTGTCACTAAGTTTTTTAAGTAA	1491	43.59	MVEASTTIFHTTLLPSLSPLTTRPSLSLSIRRTTSIVRCTISTTSDTSKAPAAIPWGCEIDSVDNAAALQKWLTMSGLPDQKMSLQKVDVGERGLVADNNIRKGEKLLFVPPPLVISADSEWSFPEAGEVLKRYNVPDWPLIATYLISEASLMESSRWSSYISALPRQPYSLLYWTRAELDRYLEASQIRERAIERINNVTGTYNDLRARIFSKHPNLFPEEVFNMETFRWSFGILFSRLVRLPSLDGRVALVPWADMLNHSCDVETFLDYDKSTKGVVFTTDRAYQPGEQVFISYGRKSNGELLLSYGFVPRQGTNPRDSVELPLMLKKSDKCYEQKVEALKKHGLSASQCFPLQVTGWPLELIAYAYLAVSPPSMSAKFEEMASAASNKNNSNKEIKYPELEEEALQFILDSCESSISKYTKFLQASGSMDLDITSPKQLNRKVFLKQLAVDLCNSEQRILFRAQYILRRKLRDMRRGELKALKLFDSVTKFFK	496

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cobi4g03171	496	Gene3D	set domain protein methyltransferase, domain 1	63	311	-	-
	Cobi4g03171	496	SUPERFAMILY	RuBisCo LSMT C-terminal, substrate-binding domain	327	495	IPR036464	-
	Cobi4g03171	496	PANTHER	UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE	66	471	IPR050600	GO:0016279(PANTHER)\|GO:0018026(PANTHER)
	Cobi4g03171	496	Gene3D	-	315	486	IPR036464	-
	Cobi4g03171	496	Pfam	SET domain	93	297	IPR001214	GO:0005515(InterPro)
	Cobi4g03171	496	ProSiteProfiles	SET domain profile.	81	297	IPR001214	GO:0005515(InterPro)
	Cobi4g03171	496	FunFam	Ribulose-1,5 bisphosphate carboxylase-oxygenase large subunit N-methyltransferase, chloroplastic	48	310	-	-
	Cobi4g03171	496	FunFam	Rubisco methyltransferase family protein	316	479	-	-
	Cobi4g03171	496	Pfam	Rubisco LSMT substrate-binding	330	463	IPR015353	-
	Cobi4g03171	496	Coils	Coil	190	210	-	-
	Cobi4g03171	496	CDD	SET-RBCMT	76	311	IPR044431	GO:0016279(InterPro)\|GO:0018022(InterPro)
	Cobi4g03171	496	PIRSF	RMT-SET	4	493	IPR011192	GO:0009507(InterPro)\|GO:0030785(InterPro)
	Cobi4g03171	496	SUPERFAMILY	SET domain	66	313	IPR046341	-
	Cobi4g03171	496	SMART	set-7	81	303	IPR001214	GO:0005515(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cobi4g03171	-	-

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Cobi	SET	7.5e-11	CL0489		TR	SET