Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cobi4g03172	ATGGAAGCTCTTATGCATATCGGAGTTAGGGTTTATTCCGATCCTATAAACCCTAGCTCCAGATTCAAACTCCGTAAGCCTCTAATGGACGGCCGTAGAACTAATCTCACTTGTGTTCGAGCTCAACAGTCTAGCACAAAGAACGGGTTTTTGAGTGCTACTTCAGCTACTGAATCAGTAGCTGAAGAACTGAAAAGCAAAGAGTGGGAAATTAGTGCTCTAAAAGATGAAATAGCTGCAACTCAGGGCATTCGGATAAGAAGACGGCCTCCAACCGGGCCTCCATTGCATTATGTTGGTCCTTTTGAGTTTCGGTTACAAAACGAAGGGAATACTCCTCGTAACATACTAGAGGAAATTGTATGGAATAAGGATACAGAGGTTGCACAGATGAAAGAGAAAAGGCCATTATTTACTTTAAAAAAGGCTGTTGAAGAAGCTCCTCCTCCAAGAGACTTTCTAGGAGCTCTTAAGGCATCGTATTTAAGAACGGGATTGCCTGCTTTAATTGCTGAAGTGAAAAAGGCTTCACCGAGTAGAGGCGTTCTAAGGGAAGATTTTAATCCTGTTGAAGTTGCACAAGCTTATGAGAAAGGCGGGGCCGCGTGCCTTAGTGTTTTGACTGATTCAAAATATTTTCAGGGAAGCTTTGAGAATCTAGAGGCTATACGTAGTGCTGGAGTCAAGTGCCCTCTTTTGTGCAAAGAGTTTATTGTGGATGCATGGCAGTTGTATTATGCAAGAGCAAAGGGTGCAGATGGTGTTTTGTTGATTGCAGCTGTTTTACCAGATCTTGATATAAAATATATGCTTAAGATTTGCAAAATGATTGGACTTACTGCACTCGTTGAGGTGCATGATGAGAATGAAATGGATCGGATGCTGGCAATTGATGGAATTGAAATCATTGGCATCAACAACCGCAACCTTGAAACATTTGAAGTCGATATTAGTAACACAAAGCAGTTGCTTGAAGGAAAACGTGGGGAAACGATCCGACAAAAGGACATTATCGTGGTTGGGGAGTCTGGACTGTTCACCCCTGCTGACATTGCCTATGTCCAAGCAGCTGGTGTGAAAGCTGTATTGGTCGGTGAGTCGATTGTGAAGCAGAAAGATCCAACGCAAGGAATTAGAGATCTTTTTGGTAAAGATATAACGGGTTAA	1167	42.42	MEALMHIGVRVYSDPINPSSRFKLRKPLMDGRRTNLTCVRAQQSSTKNGFLSATSATESVAEELKSKEWEISALKDEIAATQGIRIRRRPPTGPPLHYVGPFEFRLQNEGNTPRNILEEIVWNKDTEVAQMKEKRPLFTLKKAVEEAPPPRDFLGALKASYLRTGLPALIAEVKKASPSRGVLREDFNPVEVAQAYEKGGAACLSVLTDSKYFQGSFENLEAIRSAGVKCPLLCKEFIVDAWQLYYARAKGADGVLLIAAVLPDLDIKYMLKICKMIGLTALVEVHDENEMDRMLAIDGIEIIGINNRNLETFEVDISNTKQLLEGKRGETIRQKDIIVVGESGLFTPADIAYVQAAGVKAVLVGESIVKQKDPTQGIRDLFGKDITG	388

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cobi4g03172	388	PANTHER	TRYPTOPHAN BIOSYNTHESIS PROTEIN	57	384	IPR045186	GO:0000162(PANTHER)\|GO:0004425(InterPro)\|GO:0004425(PANTHER)\|GO:0004640(PANTHER)
	Cobi4g03172	388	ProSitePatterns	Indole-3-glycerol phosphate synthase signature.	169	187	IPR001468	GO:0004425(InterPro)\|GO:0006568(InterPro)
	Cobi4g03172	388	Gene3D	Aldolase class I	109	387	IPR013785	-
	Cobi4g03172	388	SUPERFAMILY	Ribulose-phoshate binding barrel	124	383	IPR011060	-
	Cobi4g03172	388	Hamap	Indole-3-glycerol phosphate synthase [trpC].	115	383	IPR013798	GO:0004425(InterPro)
	Cobi4g03172	388	CDD	IGPS	153	381	IPR013798	GO:0004425(InterPro)
	Cobi4g03172	388	FunFam	Indole-3-glycerol phosphate synthase chloroplastic	109	387	-	-
	Cobi4g03172	388	Pfam	Indole-3-glycerol phosphate synthase	117	381	IPR013798	GO:0004425(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cobi4g03172	K01609	indole-3-glycerol phosphate synthase [EC:4.1.1.48]