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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi4g03193 ATGGCTATAACTATAAGTTATACCCTTATTCTAATTTCTTATTTTCTTTCATCTCATTTTGATATATCATATGGTTTAAGATGTTCGGATAATAGATTAGCATCTAAAGGTGTCTACACTTTTTGCAAAGATCTTCCTCATTTATCATCCCGACTTTATTGGGTATACAACTCAACCATGGGCGTAGCCCAAATTGCGTACCAGGCCCGACAAGGAGCCGGTGGTTGGGTTGCATGGGCCATCAACCCCAACCAAATAGGTATGGTGGGGTCCGAAGCATTGGTGGCTTTTGTAAACAATAATGGAAGTGTGATTGTTTATCCAACAATGATAACTAGTTACAGCCCGTCAATGCAGCCCGCGGATCTTAGCTTTCAGGTTTCGGACCTTTCGGCTGAGTTTGTAAACAACGAGATTACTATTTATGCGATTGTGGGCCCCTTTGCAGGTGGGTCCGTTGTTAATCAAGTATGGCAAGCGGGGAATTTGGTTTTGGATGGTGTTCCTCAAATGCATGAAGTTACTCAACCAAACCTTCAATCGACAGGGGAGCTTGATTTCTTGACCGGTTAA 573 42.41 MAITISYTLILISYFLSSHFDISYGLRCSDNRLASKGVYTFCKDLPHLSSRLYWVYNSTMGVAQIAYQARQGAGGWVAWAINPNQIGMVGSEALVAFVNNNGSVIVYPTMITSYSPSMQPADLSFQVSDLSAEFVNNEITIYAIVGPFAGGSVVNQVWQAGNLVLDGVPQMHEVTQPNLQSTGELDFLTG 190
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi4g03193 190 ProSiteProfiles DOMON domain profile. 48 161 IPR005018 -
Cobi4g03193 190 CDD DOMON-CIL1-like 39 189 IPR045265 -
Cobi4g03193 190 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 7 189 - -
Cobi4g03193 190 Pfam Protein of unknown function (DUF568) 88 187 IPR045265 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi4g03193 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cobi Cobi-Chr3:15871140 Cobi4g03193 Cobi-Chr4:81480722 wgd