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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi4g03247 ATGACGCCTAAGAAGCGATTCGTAAAAGCTGCTTCCAGACGCCATATCTCGCCATTCGTGTTAAAGTTTCTGATATTATTATTAATATTATTCTGTCTCGTCGTGTTTTTCGGATTATTCACTCAATTTAGGTTTAAATCGGCGTCTAGTCTCACGGATTTCGGATTTGATGAGCTGCGTATTGAAAGCTTTCGGATGAAGATCGCGTTCATGTTCCTTGTTCGTGATAGTATTCCGCTTGATTTCCTCTGGCATAATTTCTTCAAGAATGCAGATCCTGAGAAATTCTCAATTTACATCCACTCGAAGCCTGGTTTTGTGTTTGATGCATCATCTACCAGATCAGTATTTTTCTACAACCGACAGTTGGAAAACAGTGTTGAGGTGGGTTGGGGTAAGCCGACTATGATTCAAGCAGAAAAACTGCTGTTCAAAGCAGCCCTTGATGATCCACATAATCATATATTTGTTCTTCTCTCTGACAGGAGATTGACTAGGAAATAA 504 39.88 MTPKKRFVKAASRRHISPFVLKFLILLLILFCLVVFFGLFTQFRFKSASSLTDFGFDELRIESFRMKIAFMFLVRDSIPLDFLWHNFFKNADPEKFSIYIHSKPGFVFDASSTRSVFFYNRQLENSVEVGWGKPTMIQAEKLLFKAALDDPHNHIFVLLSDRRLTRK 167
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi4g03247 167 Pfam Core-2-I-Branching enzyme 68 161 IPR003406 GO:0016020(InterPro)|GO:0016757(InterPro)
Cobi4g03247 167 PANTHER CORE-2-I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 37 161 IPR044174 GO:0016757(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi4g03247 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cobi Cobi-Chr4:82237331 Cobi8g02619 Cobi-Chr8:75659826 dispersed
Cobi Cobi-Chr4:82237331 Cobi1g01257 Cobi-Chr1:49657998 transposed