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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi4g03259 ATGATCTACCTCTTCTACTTCATTCTCTTAATCGAGAAGCTCACAATCCTCTTACTCCTCTTCAAAACTCCACTCCGCAAGCTTCTGATAATCGGACTCGACCGCGCCAAACGCGGACGCGCGCCGTTGGTCGTCAAGTCCGTCGGCGCCACCGTGTTCGTCATCATGATGTATAATGTTTATAGTGTTACTGAGATTCAGAGTCGACCGGCTGACGTCATCAACCCGACGGATCAGATTATACTTGCGTATCATATGCTTGAAGCTTCTCTCATGGGATTCTCTCTTTTCCTAGCACTAATGATAGATAGACTACATCATTACATACGGGAGCTTCGAATACTAAGAAAAACAATGGAAGCTGCAAAGAAACAAAACCGAGCTGCGGAAGAAACCAAGAACAAGGGTGCAGATGATGTTAAAATCCTAAACGATGAAATATCCAAACTGAAATCACAAATTAAGAAACTGGAATCTGAACATGAATCAAAGGATAAAGAGGTTAAATCAGCAGCAGCGAATTCAATGGCTCTCAAGAATCAATCGGAAGGTTTTCTTCTTGAGTACGATCGGCTGTTAGCAGAAAACCAGAGTCTTAGGGATCAGTTGCGGGCCATTGATGAAAACATGTCTTTTTCTAGTGGAAAGAAGAATATGTGA 660 42.73 MIYLFYFILLIEKLTILLLLFKTPLRKLLIIGLDRAKRGRAPLVVKSVGATVFVIMMYNVYSVTEIQSRPADVINPTDQIILAYHMLEASLMGFSLFLALMIDRLHHYIRELRILRKTMEAAKKQNRAAEETKNKGADDVKILNDEISKLKSQIKKLESEHESKDKEVKSAAANSMALKNQSEGFLLEYDRLLAENQSLRDQLRAIDENMSFSSGKKNM 219
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi4g03259 219 PANTHER BCR-ASSOCIATED PROTEIN, BAP 3 200 IPR008417 GO:0005783(InterPro)|GO:0005789(PANTHER)|GO:0006886(InterPro)|GO:0006888(PANTHER)|GO:0016020(InterPro)|GO:0070973(PANTHER)
Cobi4g03259 219 Coils Coil 189 209 - -
Cobi4g03259 219 Gene3D - 136 199 - -
Cobi4g03259 219 FunFam B-cell receptor-associated protein 29 136 199 - -
Cobi4g03259 219 Coils Coil 105 174 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi4g03259 K14009 B-cell receptor-associated protein 31
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Event-related genes

Select Gene_1 Gene_2 Event_name
69674 Cobi11g02512 Cobi4g03259
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cobi Cobi-Chr11:68925018 Cobi4g03259 Cobi-Chr4:82362120 dispersed
Cobi Cobi-Chr4:808405 Cobi4g03259 Cobi-Chr4:82362120 dispersed
Cobi Cobi-Chr4:7908986 Cobi4g03259 Cobi-Chr4:82362120 dispersed