AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi4g03267 ATGAAATACAATGACATCTCCCACTTTAGCCACCCGCAACACCGGCTCAAGCCTAGCTACACCGAGGCCCCATTCAAGTGCGACGGGTGCAAGGAAGTCGGTATAGGGTCTAACTACAAATGCACAACATGTAACTATGACTTACATGTCCATTGTGCCATTCCTACCCCTTCTATCACCCACCCATTTTACACTAAGTGTTCATTTCAATTTTTATCGCGCCCTCCGGGCCCCATTGCACGTTATTGCAACGCGTGTGAGAAAGTAGTGTCGGGGTTTGTTTACCATTGTAAGTTGTGTGGATTCGACCTTCACCCGTGTTGTGCTAAGCTTCCAACTATGTTGGATGATGGTGAGGTGGAGTTGTACTTGTATAGGAAAGTGGGGTCCGCCTGTCACAGGTGTGGCAGGAAAGGACGAAGTTGGAGTTACAGGTCAAAGTGCAAGAAGTACAACTTGCATGTGGCTTGTGTGAAAGAGATGTTGGTAGAGAGTTGGCATGAGTTATACTTTGGTAGAGGTGGGGTGAATGGTAAAAACCATAATTTGTGTGGGCAAAAAGGTAAAATAGAGACAAGAATTCCAAGCTTGAAGGGTACATTGGAAAGCTATCATCACCATAAGCATCATAAAAGCAAAGGGAAAGTGAAAAAATGTTGTGAGATGGCTGGTTTGGCAATGCAGTTTGTGATTTCCGCGGTTCTTGGTGATCCAACCACTCTAATCGCGGGTGTCGTTGGTGCCTTGATGTCGGAATAG 759 45.85 MKYNDISHFSHPQHRLKPSYTEAPFKCDGCKEVGIGSNYKCTTCNYDLHVHCAIPTPSITHPFYTKCSFQFLSRPPGPIARYCNACEKVVSGFVYHCKLCGFDLHPCCAKLPTMLDDGEVELYLYRKVGSACHRCGRKGRSWSYRSKCKKYNLHVACVKEMLVESWHELYFGRGGVNGKNHNLCGQKGKIETRIPSLKGTLESYHHHKHHKSKGKVKKCCEMAGLAMQFVISAVLGDPTTLIAGVVGALMSE 252
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi4g03267 252 ProSiteProfiles Zinc finger phorbol-ester-DAG-type profile. 13 67 IPR002219 -
Cobi4g03267 252 PANTHER CYSTEINE-HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 2 249 - -
Cobi4g03267 252 Pfam C1 domain 74 109 IPR004146 -
Cobi4g03267 252 Pfam C1 domain 9 53 IPR004146 -
Cobi4g03267 252 SUPERFAMILY Cysteine-rich domain 36 114 IPR046349 -
Cobi4g03267 252 Gene3D - 12 59 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi4g03267 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
69648 Cobi11g02465 Cobi4g03267
69749 Cobi11g02832 Cobi4g03267
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cobi Cobi-Chr11:71955878 Cobi4g03267 Cobi-Chr4:82448816 wgd