AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi4g03272 ATGAGCGAATCGGAGCCACCGTCGGAAGCTAAGAGAACCACCGTCGGACCACCGTCCGTTAAGGCTTACCTCGATCCTAATTACTGGAATGAGAGGTTTAGTTCTGAGGATCATTACGAATGGCTCAAGGATTACTCGCATTTTCGGCATTTGATCCAGCGGCATATTAAACTGGATTATTCAGTATTGGAGCTTGGGTGTGGAAATTCGCAACTATGTGATGAGTTATATAAAGAAGGAATCACTAATATAACCTGCATTGATCTATCTTCGGTTGCAGTTGCGAAAATGCAAAAACGATTGCTTTCTAAAGGCTACAAAGATGTTAATGTGTTGGAATGCGATATGTGCAATCTTTCGTTTGCTGATGAATCGTTTGATGTTGTTATAGAGAAAGGAACTATGGATGTTTTGTTCGTGGACAGTGGCGACCCATGGAACCCACGGCCCGAGGCTGTGAACAAAGCAATGGCGATGCTTCAAGGTGTTCATAGAGTTTTGAAACCGAATGGGATTTTCATCTCAATTGCTTTTGGTCAGCCACACTTCAGGCGTCCACTATTTAACGCACCGGAGTTTACATGGTCCATTGACTACACTACATTTGGAGATGGATTTCATTATTTCTTTTATATTTTAAGGAAGGGATGCAAATCATTAGATGCAGACGCTGATGTGAAGAAAGTTGAAACACCGTCTCTATGTCTTTATCAAGATGAATTGGATAATGAAGATTATTTATTCCGCACCAACATTGATGATGAAATTGATGACCGAAGATGA 783 41.12 MSESEPPSEAKRTTVGPPSVKAYLDPNYWNERFSSEDHYEWLKDYSHFRHLIQRHIKLDYSVLELGCGNSQLCDELYKEGITNITCIDLSSVAVAKMQKRLLSKGYKDVNVLECDMCNLSFADESFDVVIEKGTMDVLFVDSGDPWNPRPEAVNKAMAMLQGVHRVLKPNGIFISIAFGQPHFRRPLFNAPEFTWSIDYTTFGDGFHYFFYILRKGCKSLDADADVKKVETPSLCLYQDELDNEDYLFRTNIDDEIDDRR 260
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi4g03272 260 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 27 210 IPR029063 -
Cobi4g03272 260 Gene3D Vaccinia Virus protein VP39 21 230 IPR029063 -
Cobi4g03272 260 CDD AdoMet-MTases 62 178 - -
Cobi4g03272 260 FunFam EEF1A lysine methyltransferase 4 21 232 - -
Cobi4g03272 260 PANTHER SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 13 216 IPR051419 -
Cobi4g03272 260 Pfam Methyltransferase domain 59 177 IPR025714 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi4g03272 K22857 EEF1A lysine methyltransferase 4 [EC:2.1.1.-]