Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cobi4g03273 | ATGGAGCTCCGGTCAATCCACTCGCCGGTCGTTAGTAGCATACCTACTACTAAAGCCTCAATTGAAAACCGTCAGCTACAATGCTACCGCCAGTTAATCAGATCGTTCGGTACGAACAGAGTTGTTCAATCGAATTCAAATGCGGTTAGGTTTAAACCGGTCCGGTTCAACGTTCAGGCGTCAGCAACAGTTGGTTTGCAGCCTGCTGAAACAAAAGCAAAAGATGGTGAGAAAGATGAAAATCTCATATTCGTTGCAGGAGCAACGGGCAAAGTTGGTTCACGAACAGTAAGGGAGCTTTTGAAGTTAGGATTTAATGTTCGAGCTGGTGTAAGAAGTACTCAAAGAGCGGAATCTTTGGTGAAGAGCGTGCAGCAGATGAAGCTTGATGGAAGTCAGCCTATAGAGAAGCTTCAACTTGTGGAGTGTGATTTGGAGAAACCAGAGCAAATTAAGCCTGCATTGGGCAATGCTTCAACAGTTATATGTACCATTGGTGCGAGTGAGAAGGAAGTATTTGATGTTACTGGGCCCTACCGAATTGACTTTCAAGCCACTAAAAACCTTATTGATGCAGCTGCTGCTGCAAAAGCGAAACACTTTATTTTGGTTACTTCTTTGGGAACTAACAAGTTTGGATTTCCTGCTGCTGTATTGAATTTGTTTTGGGGTGTCCTATGTTGGAAAAGGAAGGCTGAAGAAGCACTGCTTGCTAGTGGGATTCCTTACACTATAGTGAGGCCTGGAGGCATGGAGCGTCCTACAGATTCCTTCAAGGAAACACATAATCTTACCCTCTCTCTAGAAGATACTTTATTTGGCGGTCTAGTTTCAAATTTACAGGTGGCAGAACTCCTTGCGTTTATGGCTAAAAACCCCAATCTTTCATATTGTAAAGTAGTTGAAGTAGTTGCAGAAACAACAGCACCATTGACCCCCATGGGTGATCTCTTAACAAAAATACCACCTCAACGCCCCATACCTCCCCAACCTAAGGAGCCGGAGGCTATCAAAGAACCTGAACCTGTTTCCAAAAGCACCATAATTGAGACTTCAAGCGTTGTCACTGAACCACAAGCCGAGTCAAAAATTGCTTCCACAAGACCACTTTCTCCATATACCGCCTATGAAGGTTTGAAACCACCTTCATCTCCAACTCCATCTGGCGGCAGTAAGGCGATAGTTGAAGCAGTAGCAGCTCCCCCTACTGTTCCTGAAACTAGCACACAAGTGGAAACAGATACTGTTACAACCGAACCTGCACCCGTGGCTGCAGAATTGCCGAAAACCAGACCCCTCTCTCCTTATACCGCCTATGAAGGTTTGAAACCACCTTCATCCCCAACTCCATCAGGCGGCAGTAAAGCGGTGGTTGAAGCAGTATCAGCTCCTCCTACTGTTCCTGAAACTAGCACACAAGTGGAAACAGTTACGATTACAACCGAACCTCCACCATTGGCTGCAGAATTGCCGAAACCCAGGCCTCTCTCTCCTTATACTGCATATGAAAATCTGAAGCCTCCTTCATCACCAAGTCCAAGTAAACCATCAGTATCACCGCCACCAACATCCATTGTAGATAACGGGTCTCCCATTGCTCCCACACCCGAAGACACCACAGATCACACAACAGTGAAACCGAGGCCACTTTCACCGTATCACATGTATGAAAACTTGAAGCCTCCTAGTTCTCCTACACCTTCTGCTCCTAAATAA | 1716 | 45.69 | MELRSIHSPVVSSIPTTKASIENRQLQCYRQLIRSFGTNRVVQSNSNAVRFKPVRFNVQASATVGLQPAETKAKDGEKDENLIFVAGATGKVGSRTVRELLKLGFNVRAGVRSTQRAESLVKSVQQMKLDGSQPIEKLQLVECDLEKPEQIKPALGNASTVICTIGASEKEVFDVTGPYRIDFQATKNLIDAAAAAKAKHFILVTSLGTNKFGFPAAVLNLFWGVLCWKRKAEEALLASGIPYTIVRPGGMERPTDSFKETHNLTLSLEDTLFGGLVSNLQVAELLAFMAKNPNLSYCKVVEVVAETTAPLTPMGDLLTKIPPQRPIPPQPKEPEAIKEPEPVSKSTIIETSSVVTEPQAESKIASTRPLSPYTAYEGLKPPSSPTPSGGSKAIVEAVAAPPTVPETSTQVETDTVTTEPAPVAAELPKTRPLSPYTAYEGLKPPSSPTPSGGSKAVVEAVSAPPTVPETSTQVETVTITTEPPPLAAELPKPRPLSPYTAYENLKPPSSPSPSKPSVSPPPTSIVDNGSPIAPTPEDTTDHTTVKPRPLSPYHMYENLKPPSSPTPSAPK | 571 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cobi4g03273 | 571 | PANTHER | PROTEIN TIC 62, CHLOROPLASTIC | 1 | 570 | IPR044719 | - | |
| Cobi4g03273 | 571 | Pfam | NAD(P)H-binding | 87 | 293 | IPR016040 | - | |
| Cobi4g03273 | 571 | CDD | SDR-a5 | 83 | 307 | - | - | |
| Cobi4g03273 | 571 | Gene3D | - | 79 | 321 | - | - | |
| Cobi4g03273 | 571 | MobiDBLite | consensus disorder prediction | 465 | 480 | - | - | |
| Cobi4g03273 | 571 | MobiDBLite | consensus disorder prediction | 403 | 417 | - | - | |
| Cobi4g03273 | 571 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 82 | 321 | IPR036291 | - | |
| Cobi4g03273 | 571 | MobiDBLite | consensus disorder prediction | 375 | 571 | - | - | |
| Cobi4g03273 | 571 | MobiDBLite | consensus disorder prediction | 521 | 540 | - | - | |
| Cobi4g03273 | 571 | MobiDBLite | consensus disorder prediction | 315 | 343 | - | - | |
| Cobi4g03273 | 571 | FunFam | Protein TIC 62, chloroplastic | 79 | 324 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cobi4g03273 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cobi | Cobi-Chr4:82488849 | Cobi6g03972 | Cobi-Chr6:77224250 | dispersed |