AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi4g03282 ATGGATCATCAATCTCGTGATAAATCACACAGGGGAAAGTGGAAGGATGAAGAAGAAGAAGAGGCAGTGATAATTGGGGGTATGGTGTTGGATATTCATGCCACTCCTTCTATTCCTCCAAACCCTAGAACTACTGCTCCTGGCAAGGTGCAATATGCAGCAGGTGGTGTAGCAAGGAACATTGCTGAGTGTGTATCAAAGCTTGGAACAAAGCCTTACATGATAAGTGCATTAGGATTAGACATGCCAGGTAATTTGCTGCTAGAATACTGGAAATCTGCAGGATTACCATTAGAAGGCATTCGAATGGGCCACGAGATTGAGACTCCAGTTGTATCTATTATCTTTGATACCGAAGGAGAACCGGCTGCTGGTGTTGCAAGTGTTGAATCAGTTGAGCGGTTTCTTACACCTGAATGGATTGTACAATTTAAATCCAATATAGCATCGGCTCCTATCGTGACGGTTGATGCAAACTTAAGTCCATCGGCTCTCAGAACGTCTTGTCAACTGGCAGCAGAGGTTGGTACCGCAGTGTGGTTTGAGCCGGTATCTGTAGCAAAGTCAATAAGAATTGGTTCGGTTGCGAAGTATGTAACGTTTACTTCACCTAACGAAGACGAGTTAATTTCCATGGCAAATTCTCTATCTTCCAAACAAAAATTTCCCGCGATTAAGAAAAATAATAACATGACAATATCGTCATTATTTCAACAACTAAAACCCGCAATATGGGTTTTACTTGAATCCGGGATTCAAGTGGTTATTCTAACACTCGGGTCAAAAGGGGTACTATTATGCTCCAAAAGACGGTTTGACTTTCGACATATCGGGCCGAAACGAAACAACCGGTCACATGATATTGGTAAATTGTTATATGAAACCATAAGTCAACTCTGCCCGTCTGACCGGTTTTTTAGTGCGTTACGGCTTGAAAAAAGGGGTAGTGTTAGCCCGTATGTGGTGCATCTGCCAGCTGTAGAATGTGATTCGGTGGTGAGGTTGACGGGTGCGGGTGATTGTTTGGTTGGTGGGGCGGTTGCTGCAATTTGTGCAGGTTTGGATGTTATGCAGAGTGTGGCAGTTGGGATTGCTGCTGCTAAAGGCGCGGTTGAGGCGGAGGCGAATGTGCCTAATGGTTATAAGTTGGATCAAATTGCAGCTGATGCAAGAACAGTGTACTTGGGTGCCAAGGTGGTTTTTGGTGATTCAAAGCTGTAA 1221 44.14 MDHQSRDKSHRGKWKDEEEEEAVIIGGMVLDIHATPSIPPNPRTTAPGKVQYAAGGVARNIAECVSKLGTKPYMISALGLDMPGNLLLEYWKSAGLPLEGIRMGHEIETPVVSIIFDTEGEPAAGVASVESVERFLTPEWIVQFKSNIASAPIVTVDANLSPSALRTSCQLAAEVGTAVWFEPVSVAKSIRIGSVAKYVTFTSPNEDELISMANSLSSKQKFPAIKKNNNMTISSLFQQLKPAIWVLLESGIQVVILTLGSKGVLLCSKRRFDFRHIGPKRNNRSHDIGKLLYETISQLCPSDRFFSALRLEKRGSVSPYVVHLPAVECDSVVRLTGAGDCLVGGAVAAICAGLDVMQSVAVGIAAAKGAVEAEANVPNGYKLDQIAADARTVYLGAKVVFGDSKL 406
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi4g03282 406 PANTHER ZGC:136858 25 388 - -
Cobi4g03282 406 CDD YeiC-kinase-like 23 372 - -
Cobi4g03282 406 SUPERFAMILY Ribokinase-like 23 374 IPR029056 -
Cobi4g03282 406 PRINTS Ribokinase signature 255 266 IPR002139 GO:0016301(InterPro)
Cobi4g03282 406 PRINTS Ribokinase signature 24 45 IPR002139 GO:0016301(InterPro)
Cobi4g03282 406 PRINTS Ribokinase signature 194 209 IPR002139 GO:0016301(InterPro)
Cobi4g03282 406 Gene3D - 16 395 IPR029056 -
Cobi4g03282 406 Pfam pfkB family carbohydrate kinase 21 271 IPR011611 -
Cobi4g03282 406 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 55 79 IPR002173 GO:0016301(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi4g03282 - -