AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi4g03317 ATGAATTCAATCGATATCCGAACGGAGAAGGCCAACGCGGTCTTTAGATACCGTAACCTTCAGAACCTCATAGTTCTGGTACGGTTGATAGAGATCTGTTTTTTCGTGGTTGCGATTTCCATGTTTTCGTCTCAATTTCCTTCGTTTTCGGTTAAATTGAACGTGGATTGTTTTAAAGGGATCACGTTAGCGAGTTTTAGCCCGAGGCTCGTGTTCGTTATCGGAAATGTGATTGTTGTAATTCTGTTGCTTAAATCTCGATATAATGATAATGGAGATCGGTATGGACGAATCGATGTTTACGATGAGTATGTTAAGCGGTGTCAATCGGAGAAGGTGATTAATGACGGAGAAGCTCGCCGGAAAATTTCTCCGGCGTCGGAGAGTTGCCGGAGTTCGGAGACGGAGATTAACGGCGGCCGGAAAATGACGCGATTGGATACCGATAGTGGAATGTTGAGGAATGCCCCGTCGCCGGAGATTTACCGGAGTCAGTCGGAGATAATGAAGTTAGAAAACGACGGCGGTCAAATTCGTCGGAATGTCGGTGAGACGCCGGTGCCGGAGATTTACCGGAGTCGGTCGGAGATAATGAAGTTAGAAAACGACGCCGGTCAAATTCGCCGGAATATCGGTGAGACGCCGGTGCCGGAGATTTACCGGAGTCGATCGGAGATAATGAAGTTGGAACACGACAACGGTCAAGTTCGCCGGAAATTGACGCGATCGGTTACCGAGAGAGGGATATTGCATACCGCGCCATCGCCGGAAAATATAACGGTGCGACCGGTTATCGAGAGAGGAATATTGAAGAATTTTCCATCGCCGGAGATTTGTCGGAGTCAGTCGGAGAAAATGATGAAAGTAGAATGCGACGACGGTGAAAGTCGCCGGAAACTGAGGCGGTCGGTTACAAATTGTTGTGACGGTGAGACGCCGACGTCGAAGATATATGGAGTGGATGAGTTAAGTAGTGAAGCATTTCGACGAACGGTGGAGGCGTTTATTGCTAAGCAACAACAGTCTCTAAGAGATGAAGAGTTGGCTTCGTTATTGCTTTCAATAGCCTACAAGACTAGAACCACTCATCATCGTCAACCATCAGCCCCTTTCACCACTGTCAACCATCCTTTCTCGTCACTCACCACCGTCAATCATCAAAAACAAACGTGA 1173 47.57 MNSIDIRTEKANAVFRYRNLQNLIVLVRLIEICFFVVAISMFSSQFPSFSVKLNVDCFKGITLASFSPRLVFVIGNVIVVILLLKSRYNDNGDRYGRIDVYDEYVKRCQSEKVINDGEARRKISPASESCRSSETEINGGRKMTRLDTDSGMLRNAPSPEIYRSQSEIMKLENDGGQIRRNVGETPVPEIYRSRSEIMKLENDAGQIRRNIGETPVPEIYRSRSEIMKLEHDNGQVRRKLTRSVTERGILHTAPSPENITVRPVIERGILKNFPSPEICRSQSEKMMKVECDDGESRRKLRRSVTNCCDGETPTSKIYGVDELSSEAFRRTVEAFIAKQQQSLRDEELASLLLSIAYKTRTTHHRQPSAPFTTVNHPFSSLTTVNHQKQT 390
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi4g03317 390 MobiDBLite consensus disorder prediction 364 390 - -
Cobi4g03317 390 PANTHER TRANSMEMBRANE PROTEIN 277 352 - -
Cobi4g03317 390 MobiDBLite consensus disorder prediction 124 157 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi4g03317 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cobi Cobi-Chr12:32528606 Cobi4g03317 Cobi-Chr4:83367291 dispersed
Cobi Cobi-Chr4:83367291 Cobi6g02334 Cobi-Chr6:18942175 dispersed
Cobi Cobi-Chr3:17984520 Cobi4g03317 Cobi-Chr4:83367291 wgd