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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi4g03321 ATGATGGTTTTGAAGACTTGTCTCCTAAGTTGTCTCATTGTAGCATTACTTGTATCATCATCATTTTCAGCAGGTTGCGAATCCTCCGTTCCCATGATGAATCTGGATGCCAATAATCAAAATCAGGAATCTTTATATTCAGAAGATGATCAAAGTTTTGAGAGGGATGATATCATTCATGAGAGGCTGCTAAGGGCTAATACAAAAGATTATGGACGATCGGATCCTGCACCAACGTTCGGCAAGCCCCCATTTAAACTCATACCAAACTAG 273 39.93 MMVLKTCLLSCLIVALLVSSSFSAGCESSVPMMNLDANNQNQESLYSEDDQSFERDDIIHERLLRANTKDYGRSDPAPTFGKPPFKLIPN 90
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi4g03321 90 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Cobi4g03321 90 MobiDBLite consensus disorder prediction 69 90 - -
Cobi4g03321 90 PANTHER PROTEIN CASPARIAN STRIP INTEGRITY FACTOR 1-RELATED 2 90 IPR038974 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi4g03321 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cobi Cobi-Chr4:83459973 Cobi6g01242 Cobi-Chr6:10077086 wgd