AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi4g03356 ATGGCCTCCAGAAACCCTACCGTCCGGTCAATCTCACAACAAGCTTTCGACGAAATGGTTAAGGAAAACATAGACGATCTCGGCATGGATCCATCAGAAGCCCTAGCGGACGCAATTGAAACCCTAGCTCTTCAAAACGTGGATCTCTCCGGCATTATAACCACCACACTCCCCGGCGAGTCCAATCCGGTGATCCAGTCACTCGATCGGATCAAACAGTTGGTGCAGGTGTCCAATTGGAGTGATGAAGCTGTTGTTAATGAGACTGTGAGTTTGTTTGATGATTTGATTGTATTGTGTCGTGTTGAAGGTTCCGGAAACGCTGCGATCGGTTCGAGAAATGGAGGTGTGGAGTTGATGTGTGGTGTGTGTTTGAAAGTTAGGGGTAGTGGTTTGTGTGGTGAAGTGGTTGTGAAGGCTTTGGATGTGTTGGCTGTGTTTCTGAATGATCTTCAAAGTACAGAAACATTTAGGCAAAGTGGAGGACCAAAAATGTTGATGGAGATTCTAACCAAAGAAACCGAAAATGTGAATATCTTGAACAGTGGTTTTTCTGTTGTTGCTGCTGCTTCAACTGGTAATGAGGTTATTAAGGAATCTTTTATGGAATTACACATAGATGAACTAATGGTTACAATTATGAAGAAACATAACAAAGTATGCATTCCTAGTTTGTATGATGCTATTAGAGTTCTTTTGGCTGCTGATGATAACCGTGTAGTGGCTTCACAAGTCTATGGGTATGCTCGACAATTTGCGAAAGTTGGAATTGCTGAAGCTCTTGTCGAGTCATTGAATGATGGGATTAACTCACCAGGTCTTGTATCAGCAACTATTGCACTAAAAGCTGTCGCAGTGAATGATGAAATATGCAGATCAGTTGCTGAAAAAGGTGGCATAGATTCATTGCTCATTTGTATTGATCAATCTGGCGTGCAAGGGAATACAGTTGTGGCTAAAGCTTGTTGCTCCTTATTATCGAAGTTGGCAGGAAGTGACTTCAACAAAAGTGCCATTGTTGAGAAAGGAGGGTTGAGACGACTCATCACACTCTCCAACAGACTCGCTGATGATCCTTCTGTCCTCCAAGAGGTGATGACTATCATATGCACCCTGTGCCTGCGGTCACCTGCAACAGCATCTTTGGCAATGGAAGCAGGAGCGGGAGACCTTGCTATCCAATCAATGCAAAAGTATCCTAACTCATATCAACTGCAGAAAAATGCTTGCCTTATGATCCGTAATCTTGTTGCCAGAAATCCAGAAAACAGGCCGGTTTTATTGAGTAATGGTATTGAGAAGATAATAAGGAATGCTAAGGAGAGTCACAAAAGCTGTAGAGATGCAGCCGTTGCGGCTCTTCGAGACTTGGGGCTTGACAACTACAACTCTTAG 1395 43.44 MASRNPTVRSISQQAFDEMVKENIDDLGMDPSEALADAIETLALQNVDLSGIITTTLPGESNPVIQSLDRIKQLVQVSNWSDEAVVNETVSLFDDLIVLCRVEGSGNAAIGSRNGGVELMCGVCLKVRGSGLCGEVVVKALDVLAVFLNDLQSTETFRQSGGPKMLMEILTKETENVNILNSGFSVVAAASTGNEVIKESFMELHIDELMVTIMKKHNKVCIPSLYDAIRVLLAADDNRVVASQVYGYARQFAKVGIAEALVESLNDGINSPGLVSATIALKAVAVNDEICRSVAEKGGIDSLLICIDQSGVQGNTVVAKACCSLLSKLAGSDFNKSAIVEKGGLRRLITLSNRLADDPSVLQEVMTIICTLCLRSPATASLAMEAGAGDLAIQSMQKYPNSYQLQKNACLMIRNLVARNPENRPVLLSNGIEKIIRNAKESHKSCRDAAVAALRDLGLDNYNS 464
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi4g03356 464 Gene3D - 66 464 IPR011989 -
Cobi4g03356 464 PANTHER UNCHARACTERIZED 3 460 - -
Cobi4g03356 464 SMART arm-5 287 331 IPR000225 GO:0005515(InterPro)
Cobi4g03356 464 SMART arm-5 332 374 IPR000225 GO:0005515(InterPro)
Cobi4g03356 464 SMART arm-5 420 459 IPR000225 GO:0005515(InterPro)
Cobi4g03356 464 SUPERFAMILY ARM repeat 70 457 IPR016024 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi4g03356 K24166 armadillo repeat-containing protein 6