AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi4g03368 ATGTTCTCCTCCGGCGCCGGCGGGACCTTTCACTGGTTCCGACACAATAATAATAATAATAATAATAATATGAAAGGAATCGTTGTGGGTTTTGGTTGGGGTTCAATTCAATTGAAGGATTACGTGGATCTGTATTCGTCTTCTGGCTGGAATTCGCTTATCGTTGCTTCTGATTTCCTCAATCCATTTTTTCCTGAGAGAGCCACATCGCTTGCCTTTTCCGTTCTCAACGAGCTTTTAGAGGAATTGAGGGCTAGACCATGTCCTTTAGTATTTGCAGCCTTTTCCGGTGGTTCGCAAGCTTGCATGTATAAGGTCCTTCAGATCATCGAAAGGACATGTGAAGCACATCTTAATCTGGATGATAGTCGTTTAATCATGACATGCGTCTCTGGTCAAATGTATGACTCTGGTCCGGTCAACGTGACCAGCGATTTGGGTGCGCGGTTCGCGCTCCAATCTTCTATTCTCAATGTGCCCGGTTCATCAAAGTTGGTATCAATGGTAGCAAAAGGTGTCACATCTGGTCTTGAAGCCCTGTTTCTTACTAAATATGGGTCCCACCGCTCGGAATATTGGCAAACGCTGTACTCGTCTGTTGGTCTGTGTGCCCCGTTTCTGATATTGTGTTCGGAAAATGACGATCTTGCCCCTTATCCGGTTATTTGCTCGTTTGCTCAACAAGTACAAGGATTAGGCGGGCATGTTCGTCTTATTGGATGGAAGGACTCTCCTCACTTAGGTCATTATAAGCACAACCCCATCCAATACCGAGCAGCTGTAACCGAATTTCTCGACCATTCGATCTCAATATTCAACCAAAAACTTCAAAAACTCGGTGAACGAAATGGTATGGAGGGTATGCACGATAAAATATGCGAATTAATTTGTGACCTCCAAAAGGCAGCAGTTGATTCAAACCAAAGCCTTAGACGAGTAGCAACCGGGCCAAACGACCACTTCTTCTTACCAAGTTCAGCCGAGTACCAAACCACTAAAGAATCGGGCTCGTTACAAGACGAACAAAAAACAACGGTCCATTTAGGTAGCCCACCGGGCCTGAACCCACACAGTGTTCTTGGTCAAGTGCTGTTTGATGCGTGCGTCCCTAAAAACATCGAAGGCTGGGATATTAAGTTTGAAAATAGGAAGACGTTTGCAACTGCAGGTAAACGGTCGTCATATTTGAAACGCATGAGACGATCAAGGTTATGA 1215 44.94 MFSSGAGGTFHWFRHNNNNNNNNMKGIVVGFGWGSIQLKDYVDLYSSSGWNSLIVASDFLNPFFPERATSLAFSVLNELLEELRARPCPLVFAAFSGGSQACMYKVLQIIERTCEAHLNLDDSRLIMTCVSGQMYDSGPVNVTSDLGARFALQSSILNVPGSSKLVSMVAKGVTSGLEALFLTKYGSHRSEYWQTLYSSVGLCAPFLILCSENDDLAPYPVICSFAQQVQGLGGHVRLIGWKDSPHLGHYKHNPIQYRAAVTEFLDHSISIFNQKLQKLGERNGMEGMHDKICELICDLQKAAVDSNQSLRRVATGPNDHFFLPSSAEYQTTKESGSLQDEQKTTVHLGSPPGLNPHSVLGQVLFDACVPKNIEGWDIKFENRKTFATAGKRSSYLKRMRRSRL 404
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi4g03368 404 SUPERFAMILY alpha-beta-Hydrolases 30 267 IPR029058 -
Cobi4g03368 404 Pfam Eukaryotic protein of unknown function (DUF829) 130 376 IPR008547 -
Cobi4g03368 404 PANTHER UNCHARACTERIZED 16 273 IPR008547 -
Cobi4g03368 404 MobiDBLite consensus disorder prediction 333 352 - -
Cobi4g03368 404 Gene3D alpha-beta hydrolase 142 279 IPR029058 -
Cobi4g03368 404 MobiDBLite consensus disorder prediction 333 351 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi4g03368 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cobi Cobi-Chr11:57328845 Cobi4g03368 Cobi-Chr4:83969085 dispersed
Cobi Cobi-Chr4:83969085 Cobi6g01202 Cobi-Chr6:9752393 wgd