Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cobi4g03368 | ATGTTCTCCTCCGGCGCCGGCGGGACCTTTCACTGGTTCCGACACAATAATAATAATAATAATAATAATATGAAAGGAATCGTTGTGGGTTTTGGTTGGGGTTCAATTCAATTGAAGGATTACGTGGATCTGTATTCGTCTTCTGGCTGGAATTCGCTTATCGTTGCTTCTGATTTCCTCAATCCATTTTTTCCTGAGAGAGCCACATCGCTTGCCTTTTCCGTTCTCAACGAGCTTTTAGAGGAATTGAGGGCTAGACCATGTCCTTTAGTATTTGCAGCCTTTTCCGGTGGTTCGCAAGCTTGCATGTATAAGGTCCTTCAGATCATCGAAAGGACATGTGAAGCACATCTTAATCTGGATGATAGTCGTTTAATCATGACATGCGTCTCTGGTCAAATGTATGACTCTGGTCCGGTCAACGTGACCAGCGATTTGGGTGCGCGGTTCGCGCTCCAATCTTCTATTCTCAATGTGCCCGGTTCATCAAAGTTGGTATCAATGGTAGCAAAAGGTGTCACATCTGGTCTTGAAGCCCTGTTTCTTACTAAATATGGGTCCCACCGCTCGGAATATTGGCAAACGCTGTACTCGTCTGTTGGTCTGTGTGCCCCGTTTCTGATATTGTGTTCGGAAAATGACGATCTTGCCCCTTATCCGGTTATTTGCTCGTTTGCTCAACAAGTACAAGGATTAGGCGGGCATGTTCGTCTTATTGGATGGAAGGACTCTCCTCACTTAGGTCATTATAAGCACAACCCCATCCAATACCGAGCAGCTGTAACCGAATTTCTCGACCATTCGATCTCAATATTCAACCAAAAACTTCAAAAACTCGGTGAACGAAATGGTATGGAGGGTATGCACGATAAAATATGCGAATTAATTTGTGACCTCCAAAAGGCAGCAGTTGATTCAAACCAAAGCCTTAGACGAGTAGCAACCGGGCCAAACGACCACTTCTTCTTACCAAGTTCAGCCGAGTACCAAACCACTAAAGAATCGGGCTCGTTACAAGACGAACAAAAAACAACGGTCCATTTAGGTAGCCCACCGGGCCTGAACCCACACAGTGTTCTTGGTCAAGTGCTGTTTGATGCGTGCGTCCCTAAAAACATCGAAGGCTGGGATATTAAGTTTGAAAATAGGAAGACGTTTGCAACTGCAGGTAAACGGTCGTCATATTTGAAACGCATGAGACGATCAAGGTTATGA | 1215 | 44.94 | MFSSGAGGTFHWFRHNNNNNNNNMKGIVVGFGWGSIQLKDYVDLYSSSGWNSLIVASDFLNPFFPERATSLAFSVLNELLEELRARPCPLVFAAFSGGSQACMYKVLQIIERTCEAHLNLDDSRLIMTCVSGQMYDSGPVNVTSDLGARFALQSSILNVPGSSKLVSMVAKGVTSGLEALFLTKYGSHRSEYWQTLYSSVGLCAPFLILCSENDDLAPYPVICSFAQQVQGLGGHVRLIGWKDSPHLGHYKHNPIQYRAAVTEFLDHSISIFNQKLQKLGERNGMEGMHDKICELICDLQKAAVDSNQSLRRVATGPNDHFFLPSSAEYQTTKESGSLQDEQKTTVHLGSPPGLNPHSVLGQVLFDACVPKNIEGWDIKFENRKTFATAGKRSSYLKRMRRSRL | 404 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cobi4g03368 | 404 | SUPERFAMILY | alpha-beta-Hydrolases | 30 | 267 | IPR029058 | - | |
| Cobi4g03368 | 404 | Pfam | Eukaryotic protein of unknown function (DUF829) | 130 | 376 | IPR008547 | - | |
| Cobi4g03368 | 404 | PANTHER | UNCHARACTERIZED | 16 | 273 | IPR008547 | - | |
| Cobi4g03368 | 404 | MobiDBLite | consensus disorder prediction | 333 | 352 | - | - | |
| Cobi4g03368 | 404 | Gene3D | alpha-beta hydrolase | 142 | 279 | IPR029058 | - | |
| Cobi4g03368 | 404 | MobiDBLite | consensus disorder prediction | 333 | 351 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cobi4g03368 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cobi | Cobi-Chr11:57328845 | Cobi4g03368 | Cobi-Chr4:83969085 | dispersed | |
| Cobi | Cobi-Chr4:83969085 | Cobi6g01202 | Cobi-Chr6:9752393 | wgd |