AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi4g03381 ATGAAAAGTGGTTTATGCCCAAACCGTGCCGAGTCAGCAGCAATGAACACTACATCAAGATCACTGGTTCTAATGAACTACTTTCCGGATACCCCAGATCTCACTCAAGCTTGCAAGCACAATTCAGACCCGTTAATGAGCATGGTGAGCACATGCCATGATCTAGCTGGTAAACGTTGGCCTAATTACATTGCTGTTGACTTTTACAAGAGGAGTAATGGTGGAGGTGCACCTGCTGCTGTAGATATGGCTAACGGTCAGCTGGTTTGTGGTTGTAACACCATTGCTGCATGCAGGCCGGGCATGACCTTTGGAGACTGTAACCTTCCAGAGGCTGGGGCTGCTCCAACCCCAACTTCAGCATTAAAAAGCTCTGGGAACAAGGGCGGTCAAACGGGTCAACTTGGATGGTTGTTTGGGTCAGGTTTGATTGCTATAGCCTTGTGTTTTTAA 453 47.68 MKSGLCPNRAESAAMNTTSRSLVLMNYFPDTPDLTQACKHNSDPLMSMVSTCHDLAGKRWPNYIAVDFYKRSNGGGAPAAVDMANGQLVCGCNTIAACRPGMTFGDCNLPEAGAAPTPTSALKSSGNKGGQTGQLGWLFGSGLIAIALCF 150
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi4g03381 150 SUPERFAMILY PLC-like phosphodiesterases 3 89 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cobi4g03381 150 PANTHER UNCHARACTERIZED 2 98 IPR051057 GO:0008081(PANTHER)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi4g03381 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
69741 Cobi11g02801 Cobi4g03381
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cobi Cobi-Chr1:94855165 Cobi4g03381 Cobi-Chr4:84112139 dispersed
Cobi Cobi-Chr4:84112139 Cobi6g02460 Cobi-Chr6:20271303 dispersed
Cobi Cobi-Chr4:84112139 Cobi11g02801 Cobi-Chr11:71624230 transposed