Gene detail

AGRP Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cobi4g03388	ATGGCAAGTCAAGGCATCCACGGCAATCTCCTTGAAGTAACCGTTGTTAGCTGTTGTAAACTAAAGGATACGGAATGGATTTCAAGGCAAGATCCATATGTATGTATTGAATACGGTAGCAGTAAATCGACCACTCGTACCTGTACAGATGGAGGCAAGAACCCTACATTTCAAGAGAAGTTCGTCTTTACCCTAATCGAAGGATTGAAAGATATGAATGTATCGGTTTGGAATAGTAATACGGTGACACATGATGATTTCATCGGTGGTGGAAAGATTCCATTAACAAAAGCTCTTTCTCACGGATTTGATGATAGTAGTTGGCCTTTACAAAGTACAACCGGCAGGCATGCCGGAGAGGTCCGAATAATAATGCATTATACTAGTGGAAATAAACCATCAAAAGATTATACTCAGAAACCATCAAAAGGTTATGCACCATCAACACCGTCACATGTCCCGCAACATGCACCTTCGATGCCCATGTACCCTGCGACGCCACCGGCTTATGCTCCACCAGGTGGCGCTTATCCACCACCTGGTGGGGCATATCCTGCACCCTACTCCGCCTACCTACATAATACTGGTGGGTATGCACCACCACCGGCTTATCCTCCTTCAGGTGGCGCTTATCCTCCACCTGGTAGTGCTTATCCTCCTCAACCATATCCACCAAATCCAGCTTACGGATCACATTATCCCCCTGGTTCTCCGTTCCCAGGATTGTATCCCCCACCACCTTATTGA	747	46.32	MASQGIHGNLLEVTVVSCCKLKDTEWISRQDPYVCIEYGSSKSTTRTCTDGGKNPTFQEKFVFTLIEGLKDMNVSVWNSNTVTHDDFIGGGKIPLTKALSHGFDDSSWPLQSTTGRHAGEVRIIMHYTSGNKPSKDYTQKPSKGYAPSTPSHVPQHAPSMPMYPATPPAYAPPGGAYPPPGGAYPAPYSAYLHNTGGYAPPPAYPPSGGAYPPPGSAYPPQPYPPNPAYGSHYPPGSPFPGLYPPPPY	248

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cobi4g03388	248	Gene3D	C2 domain	9	129	IPR035892	-
	Cobi4g03388	248	CDD	C2	11	108	-	-
	Cobi4g03388	248	MobiDBLite	consensus disorder prediction	131	155	-	-
	Cobi4g03388	248	Pfam	C2 domain	10	100	IPR000008	-
	Cobi4g03388	248	SUPERFAMILY	C2 domain (Calcium-lipid-binding domain, CaLB)	8	129	IPR035892	-
	Cobi4g03388	248	PANTHER	CONSERVED SERINE PROLINE-RICH PROTEIN (AFU-ORTHOLOGUE AFUA-2G01790)	1	245	IPR052981	-
	Cobi4g03388	248	SMART	C2-3c	10	107	IPR000008	-
	Cobi4g03388	248	MobiDBLite	consensus disorder prediction	129	160	-	-
	Cobi4g03388	248	ProSiteProfiles	C2 domain profile.	1	109	IPR000008	-
	Cobi4g03388	248	MobiDBLite	consensus disorder prediction	202	235	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cobi4g03388	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	69738	Cobi11g02787	Cobi4g03388

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cobi	Cobi-Chr3:4799553	Cobi4g03388	Cobi-Chr4:84187105	dispersed
	Cobi	Cobi-Chr11:71364768	Cobi4g03388	Cobi-Chr4:84187105	wgd