AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi5g02832 ATGCGGAAGACCGTCCCGTCGTTACAAGAAAACAAGAAACCGTTCCATCGGAGGAACGGTTCAGGCGAGATTCATGTATTTGAATCCGCACGTTACTTTGAGAGCAGTTATGACACCACCCTCTCTCATAAAAATTACATGAGAGAGGGTGGTGGCAGACTGAGTCTCGATATCCCCAACACTAGACGAAATTCGATTCCCTTACAAGCCATGATGATGGATAACCGAAACTCGGTTCCTTTACAAAGCATGCTAATGGATCAAAACCCTATGATGATGATCAAGAATGATGTAAAGAAGCATAAGCAACCAAGCTCACCAGGAGGAAAGTTGGCTCATTTCTTGAACTCTCTTTTCAACCAAACATCTTCTAAGAAGTCAAAGTCCAAATCAAAGTCAACCACATCAACATATTCTATGAAAGATGAAGATGAGAGCCCTAGTGGTTGGAGAAGGAGGAGGAGGAGTAGCATTAGTCTTTTCAGGAGTGGAAATAGTAATTCCAACATAAATGCAAGTGACACAAAATCTACTTATTCAAAAACAACACAACCACAAGCAACAACAACAACAACTTACAAAGATCTTAGAACCTCAACATGTGAAATTACCAAAATGCCCCTCACTGAAAACCACAACAAGAATGAAACCCTAATGATCAAAAGTGTGTTTCCTGACCAAAAAATAAGTTGTGTAAAACATGATGATGATCATCATAAGAAGCATGATCCAACGGTGGAGATTAAAGAACTCAAAAGTTTTATTTTTGATGATGGTGGAGATAGTGATTCAAGTTCTGATCTTTTTGAGTTAACAAATTGTGATTTGGGTTATTATTCAAGTGGTTTGCCAGTTTTTGAAACAACCCGAATGGACAACATTAAGAGGGGTGCACCAATCTCTAGCTAA 909 39.05 MRKTVPSLQENKKPFHRRNGSGEIHVFESARYFESSYDTTLSHKNYMREGGGRLSLDIPNTRRNSIPLQAMMMDNRNSVPLQSMLMDQNPMMMIKNDVKKHKQPSSPGGKLAHFLNSLFNQTSSKKSKSKSKSTTSTYSMKDEDESPSGWRRRRRSSISLFRSGNSNSNINASDTKSTYSKTTQPQATTTTTYKDLRTSTCEITKMPLTENHNKNETLMIKSVFPDQKISCVKHDDDHHKKHDPTVEIKELKSFIFDDGGDSDSSSDLFELTNCDLGYYSSGLPVFETTRMDNIKRGAPISS 302
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi5g02832 302 MobiDBLite consensus disorder prediction 1 21 - -
Cobi5g02832 302 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 28 295 IPR039621 GO:0009734(InterPro)
Cobi5g02832 302 MobiDBLite consensus disorder prediction 121 143 - -
Cobi5g02832 302 MobiDBLite consensus disorder prediction 121 193 - -
Cobi5g02832 302 MobiDBLite consensus disorder prediction 159 193 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi5g02832 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
69800 Cobi12g00195 Cobi5g02832
71279 Cobi2g00602 Cobi5g02832
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cobi Cobi-Chr12:1910788 Cobi5g02832 Cobi-Chr5:78949352 wgd
Cobi Cobi-Chr2:7605454 Cobi5g02832 Cobi-Chr5:78949352 wgd