Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cobi5g02833 | ATGAAGGAGCAGATGGAGAAATCGGACGGTCTGGATATCGTTTCAATCGGAAAGCTGTACGACGGTCCGTGGGAGAAGAAGTATTGGAGTTCGTCTAGGGGTAAAGACAGGCATCCATATCCAGTTGGATATGTAGCTCATCGGGCGAATAACGGGAATACCTACAAGATGGCAATTCTTGAGGGACTTAAAGGACCTGAATTTGTGATTAGTTCCACGGATGGGCAATCTTGTTCTGGTCAAACTCCAGATATTGCATGGGAGGGCTTTCAAAAGAAGAGCAGTGTGCGAATAAAATTTTGGCGTGGAAAGAGATTTTCATGCAAGATAGATGGCGCAGAGCTTTTTGGGTTCAAAAATCCCCAAGTAATGAGGTTACTGCGGGGATTGAAAGCAAATGTCAGCGAAATTTCACAGAACAGTTCGCCATCTTTAGCCGTTGGCAAAGGACAGTCTGAAGGAGCAGATGAACACCATACTAAATATCCTGATTTGCAAGTGAATTCAGTTAAAGTCAAGGGTAAAGAGAAAAGAAGTAATAAACGTAAAGAAATTCATGTGAAATCAGTTAGTGGGCCCGGACGCAAAAGAGAGAGACCTCAAGATCTGATACAAAGTGGTCAAGAACCACATACCAGGCAGAGTTTTGAAGGGGGGCATAACAATGGGGTTCTTTCAAGTTCGTCAAATTGGAACGAAAGTAATACATCTCATTTATTACCAACAGAAGACGGGATTCAGGTTGATTTAGTTATTTCGTCTGATCATCTTGAAAAAGAGAAACATTGTTCTGTTCAAGAAGCAATCACTGAAGAAGGTGCAAAGTTGTCAAAAAGCCAGGAAAATCATGACTTGTCGAAGTTTAACCGCGCACCAGGGTTCACTTCCTCAAAAGATGAAAAGGAAGACCCGCCACTTCAAAAAGAATCACAGATGTTGGATGATATGAACCTCTATGCACCCGATACTTTGGATCTAACCTTAGACAGTTTATGCAATTTGGAGGTGGAGATTCCCAAAGAAAGTACCTGCACATTAAATGAAAAGTTAAATTTTTCTCAAATTTTAGTTTCTGAACAATGTATAACCGACTCCCAGTCAAAAGACGAGACAGGTATTGCTACTGGAGGTGATCTTTATGACAAGAGTGACTCAGATCCAGCTGGACAAGATATATCCAACTCAATGATGGCATTATTACTTCCAAGAGCTCTTCCTCTGCTTAAGACTTTTTCAAGAAAGAAAAAGAAAAATACTAATGGAGTGTCCCAGAAGGAAAGAAAGGAGGTTGACCAATTTCTTAAAGATGAACCTCCAGCCAAATCTTCTGAGCATTTGGAAAATCTCAGTGGTGAAGTTAACATTCCAGACAAACCTTCTACTGAAAACTTTAAATTTGAGAAGCAGGATGAAAGTGTTCTATTTACGAGTACAAATATGGATTCAGTTGTACCTGGTTTAGAAGACTCAACAACGGTTGCGCCTGATAGTTTTGAGGACGATCAGTGTGAAGTTATGGATGCTGTTAAAGATGATCAAAGTACATCCACTATAGATTCATGCACCCGTGAAGTGCTTCATGAACTAGAAGCTAGTGTTGACAATATGTCTTCTATGCTAACTGTTGACCAAAAGGTAGATGGTTTGACTTCAGTTTTGCAGGGTCAAAGAATAAGTCAACACCACAAGACTAACATGGTGCACAATATTGAGGAACCTAATGTGGCGCCTAATGATGAGATAGATAATATCTTTGAACTTGTAGGGTGTTATATGCTTCCAACACCAATTTCAATGGTAATGTTAAGAACAAAAGGGGATGAGGTAGTTGTATGTGTTTTATGTGGCTATCTGATGGAAAACAAAAGGGCATTGTTTATTTACAAGACATCAATTAAAGGAGAAACCAAAGGATGCCCTTCTTTTATTGGTCACACAACAATCATCTCACCAACTTCAATGAACGCATCGGGTAAACAAGTTATTTTGGATAGTTCTAGGTTACAGTTTACTCCAGATGGAAAATCCATTGTTTTACTGAACAGCATTAAAGCTCCTTATTGCAGGGAGGGCAATGTGAACTGTGGGTGTTCATTGTGCACATCAGATTGCTTAGAGAAGAATGCGGTTAAAATTGTGCAAGTAAAACTTGGTTATGTTCAAGTGCTATGCAAACTGAAAACAACTGACAACGTGTGCTCCGTATTAGTTTGTGAGCCTAATTATCTTGTTGCTTCTGAAGAGAGTGGAAAAATGAACTTATGGACCATGAACTCATCTTGGAGTGCACCAACAGACGAGAGCTTTTTGTCAACATATGATTGCATGCCTAATTGTATAATTGAGATGAAAAGAATACCAAAATCTCCATCTTTTATTGTCGGTCACAGTGCATTTGGAGATTTTTGCTTGTGGGATTTAACAAGAAGAACACTTATATCCAAATTTTCAGCTCCAACAACTTCATTTCTTCCCTTCATTCCAATCTGTTTATACAGGCATCCTAGTCAACTTTTATCCACCTCAGATGCTTGTAGAAAGAAACAAGTGGAAGACATCATGGAAGAAACAAACAACCCTGATTTTCTTCCAGTAAACGACGAACAGATGTCACTTGTTCTTCTTGTCTCATCTGCCTCAAATCATGATCCTTATGATGAATATTCGTGTAAAGATACGGGGTTCGGTCCAGCTGGATCGTGGAGCCTTGCATTGTTGGCCAAAAGTAAACTGGTTACAGAAAAGCCTTTGGATCCAAGTGCCACGGTAGTTGGTGCATCATCGGGTTATGGAATCATTGGTACATGTGACGGTTCTCTTTACATTTGGGAATTATCGACCGGTACCAAGGTCGGTTATCTCAGACATTGCAAAGGAGCCACGGTGTCATGTTTGGCAGCTGATGACTCAGACTTCGGCGTGTTTGCAGTGGCTGTTGATGGCAACCAGCTGCAGGTATATGCTTCTAGAACATTGACCGATAGAAAAACGTAA | 2994 | 40.21 | MKEQMEKSDGLDIVSIGKLYDGPWEKKYWSSSRGKDRHPYPVGYVAHRANNGNTYKMAILEGLKGPEFVISSTDGQSCSGQTPDIAWEGFQKKSSVRIKFWRGKRFSCKIDGAELFGFKNPQVMRLLRGLKANVSEISQNSSPSLAVGKGQSEGADEHHTKYPDLQVNSVKVKGKEKRSNKRKEIHVKSVSGPGRKRERPQDLIQSGQEPHTRQSFEGGHNNGVLSSSSNWNESNTSHLLPTEDGIQVDLVISSDHLEKEKHCSVQEAITEEGAKLSKSQENHDLSKFNRAPGFTSSKDEKEDPPLQKESQMLDDMNLYAPDTLDLTLDSLCNLEVEIPKESTCTLNEKLNFSQILVSEQCITDSQSKDETGIATGGDLYDKSDSDPAGQDISNSMMALLLPRALPLLKTFSRKKKKNTNGVSQKERKEVDQFLKDEPPAKSSEHLENLSGEVNIPDKPSTENFKFEKQDESVLFTSTNMDSVVPGLEDSTTVAPDSFEDDQCEVMDAVKDDQSTSTIDSCTREVLHELEASVDNMSSMLTVDQKVDGLTSVLQGQRISQHHKTNMVHNIEEPNVAPNDEIDNIFELVGCYMLPTPISMVMLRTKGDEVVVCVLCGYLMENKRALFIYKTSIKGETKGCPSFIGHTTIISPTSMNASGKQVILDSSRLQFTPDGKSIVLLNSIKAPYCREGNVNCGCSLCTSDCLEKNAVKIVQVKLGYVQVLCKLKTTDNVCSVLVCEPNYLVASEESGKMNLWTMNSSWSAPTDESFLSTYDCMPNCIIEMKRIPKSPSFIVGHSAFGDFCLWDLTRRTLISKFSAPTTSFLPFIPICLYRHPSQLLSTSDACRKKQVEDIMEETNNPDFLPVNDEQMSLVLLVSSASNHDPYDEYSCKDTGFGPAGSWSLALLAKSKLVTEKPLDPSATVVGASSGYGIIGTCDGSLYIWELSTGTKVGYLRHCKGATVSCLAADDSDFGVFAVAVDGNQLQVYASRTLTDRKT | 997 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cobi5g02833 | 997 | Gene3D | - | 7 | 134 | - | - | |
| Cobi5g02833 | 997 | MobiDBLite | consensus disorder prediction | 366 | 388 | - | - | |
| Cobi5g02833 | 997 | SUPERFAMILY | WD40 repeat-like | 669 | 987 | IPR036322 | GO:0005515(InterPro) | |
| Cobi5g02833 | 997 | Pfam | F-Y rich C-terminus | 65 | 131 | IPR003889 | GO:0005634(InterPro) | |
| Cobi5g02833 | 997 | MobiDBLite | consensus disorder prediction | 275 | 307 | - | - | |
| Cobi5g02833 | 997 | MobiDBLite | consensus disorder prediction | 415 | 460 | - | - | |
| Cobi5g02833 | 997 | ProSiteProfiles | FYR domain FYRC motif profile. | 63 | 143 | IPR003889 | GO:0005634(InterPro) | |
| Cobi5g02833 | 997 | MobiDBLite | consensus disorder prediction | 138 | 240 | - | - | |
| Cobi5g02833 | 997 | MobiDBLite | consensus disorder prediction | 152 | 174 | - | - | |
| Cobi5g02833 | 997 | MobiDBLite | consensus disorder prediction | 422 | 443 | - | - | |
| Cobi5g02833 | 997 | PANTHER | TRANSFORMING GROWTH FACTOR BETA REGULATED GENE 1 | 512 | 971 | IPR040092 | GO:0005634(PANTHER)|GO:0051726(PANTHER) | |
| Cobi5g02833 | 997 | MobiDBLite | consensus disorder prediction | 205 | 240 | - | - | |
| Cobi5g02833 | 997 | Gene3D | - | 681 | 996 | IPR015943 | GO:0005515(InterPro) | |
| Cobi5g02833 | 997 | ProSiteProfiles | FYR domain FYRN motif profile. | 3 | 62 | IPR003888 | GO:0005634(InterPro) | |
| Cobi5g02833 | 997 | MobiDBLite | consensus disorder prediction | 183 | 204 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cobi5g02833 | - | - |