Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cobi6g00890 | ATGAATTCGATTCAAAACAAACAAGAAACTATGCAAACAAACTGTGAGGCCCCGGTATCAAGCCTCCTGAGCAATGGACACCCACAGTATAATGAGAGTCCTATGGAAGGGTTTATAGAACACAAAAATGATACAAACTTTATAGAACTAGACCAGACTGAATTTCTAGAGTCTTCAATCGAACCCAACAAAAAACCAACCTATCTGGGTTCATGGACTTTGCATCCCGACATTAAAAAGGCACAACTTTGCCAGTTGAATAACATTGAAGGCCAGTTTTACCCTTTCTTGGTGAATAGCAGGGTTCAATATGCTCCATTTCCCATGTTCCCTCAATGTTACCCCTATGGTTATCAGCATCAAGAGTTCCATTATTTTGTGGTCATTGATTTTGAGGCTACATGCGATAAGGACAGGAATCCTCATCCCCAGGAGATCATTGAATTCCCTTCGGTTATAGTGAGTAGTTTGACTGGTCAACTAGAAGCTTGTTTTCAAACATATGTTCGTCCAACGTGCAATCAGCTTTTAAGTGATTTTTGCAAGGATTTGACTGGTATTCAGCAAATTCAGGTGGACGAAGGAGTTACTCTTAGTGAAGCCCTTCTAAGACATGACAAATGGCTGGAGAGGAAAGGGATAAAGAATGCCAACTTTGCTGTGGTGACATGGTCAAACTGGGACTGTAGAGTCATGCTGGAATCAGAATGCAGATTCAAGAAAATCCGTAAGCCTCCTTATTTTAACCGATGGATCAACTTAAAAGTTCCATTCTGTGAGGTTTATGGCGGTGCAAAATGCAATCTGAAGGAGGCGGTCCAGATGGCAGGGCTATCGTGGCAGGGTCGACCTCACTGCGGTTTAGATGACGCCAAGAACACCGCCCGTCTACTTGCTCTGATGATGCACAAGGGTTCCAAGTTCTCAATCACCAATTCCTTGATCACTGACCACCATGCTTTCACTTGGAAACCACCACTTGTACACATCCCTTTTCCGCCATACCACCACCTGCCGCCTCACAAACCAAAGGACCTGCATTTTGTTCCAATATTTCATCCTTGCTGTTTCTGTGGGGTGAAAAGCAGTAAAGGGATGGTTCAGAAACCGGGTCCCAAACAAGGCAGCTGCTTCTTTGGGTGTGGGAATTGGACGTATGCTAGAGGTGCTCGTTGCCAGTATTTTGAATGGGCTTGA | 1197 | 44.11 | MNSIQNKQETMQTNCEAPVSSLLSNGHPQYNESPMEGFIEHKNDTNFIELDQTEFLESSIEPNKKPTYLGSWTLHPDIKKAQLCQLNNIEGQFYPFLVNSRVQYAPFPMFPQCYPYGYQHQEFHYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSLTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDEGVTLSEALLRHDKWLERKGIKNANFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKVPFCEVYGGAKCNLKEAVQMAGLSWQGRPHCGLDDAKNTARLLALMMHKGSKFSITNSLITDHHAFTWKPPLVHIPFPPYHHLPPHKPKDLHFVPIFHPCCFCGVKSSKGMVQKPGPKQGSCFFGCGNWTYARGARCQYFEWA | 398 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cobi6g00890 | 398 | ProSiteProfiles | Zinc finger GRF-type profile. | 356 | 398 | IPR010666 | GO:0008270(InterPro) | |
| Cobi6g00890 | 398 | Pfam | Exonuclease | 127 | 298 | IPR013520 | - | |
| Cobi6g00890 | 398 | FunFam | Exonuclease domain-containing protein 1 | 117 | 325 | - | - | |
| Cobi6g00890 | 398 | CDD | ERI-1-3'hExo-like | 126 | 302 | IPR047201 | GO:0000175(InterPro) | |
| Cobi6g00890 | 398 | Gene3D | - | 117 | 324 | IPR036397 | GO:0003676(InterPro) | |
| Cobi6g00890 | 398 | PANTHER | 3'-5' EXONUCLEASE ERI1-RELATED | 119 | 374 | IPR051274 | - | |
| Cobi6g00890 | 398 | SMART | exoiiiendus | 125 | 307 | IPR013520 | - | |
| Cobi6g00890 | 398 | SUPERFAMILY | Ribonuclease H-like | 123 | 312 | IPR012337 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cobi6g00890 | K18417 | ERI1 exoribonuclease 2 [EC:3.1.-.-] |