Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cobi6g01000 | ATGGGATTCAATTCAGTTTTTAGAGTTCTACAGGAGCTTTTTCCACAGGTTGATTCTCGTTTCCTGAAAGCCGTATCTTTAGAATACCCTGATGTTGATTTAGCTGTGGAAGCAGTTCTTGTTGAGACCATGTCGGATATTCGTGAACAACCACTTACAATGGGTTCTTCAAGTAATAGCCGGAGTTCACTTGGTTTCTCTAATGATAATGGCAAAGCTGGTAAAGTTAAGTCGACAAAGGATCATGTAGTTGTTAATTCGTTTATTTCTGAACGTTCAACTGAAGATCATGCTTCAAGTGTCGATGGAAGTTCACTTGGTGTAACGGAAGCTATAGATGCTGAAAATAGTGAAAATAAAGCTAACTGTTATTATGTACATCCACCTTTGGAGACATTTGGAGAGACTAATAATATTAATGCTGATACCGCGTCACCAGTTGTAATCCGTGAAAATGCTTCTCTTGATGACCATGATCAAGTACATGTTGATGAAAATACGTTAGTTGCTTCAGAAAGCAACCGATTTGTAGACATTTCTGAAACAAATTTAGCTGCAGAAGACATTGAAAAAGATGGTTCGGTAACCAACTCTGTTAATTCCGAAGATGAGTTGGTTTTGAGTTCCGTGCTTACTAGATCAGAGCAAATTTGTAGCACCGAATATCTTGATGAAGTTATTGAAGATGCTAAAAATAACAAGAAAATGCTTGCGTCGGCTATGAACTCAGTTATTGATTTAATGAAAGTAGTAGAGTCTAAGGAAAAAGCAGCTGAACAAGCAGACGAGGATGCCACACGGGGTTGTTCTGATATTCTTGCCAAGGTGGACGAGGTTAAACACGCACTTCTAAGGGCAAAAGAGGCAAATGATATGCACGCTGGAGAAGTAAATGCTGAGAAGGCGATTTTAGCTACTGAGTTGAAAGAGCTTCAGCTTCGCTTGTTTAATTTGTCAGACGAAAGAAACAAAGCGCTTGCAATTCTTGAGGAGATGCATAGAGCGTTAGAGATTAGAATGGCTGCCGCGTTAGAAGAAATTGCATCGGCAGAGCAGAAAAAGTTAGAACGAGAACGGTCTGCTAGAGAAGCACTTTTGTACCAAGAAAGCCAAATGGAGAAAGTGGTTGAAGAGTCTAAGAAACTGAAGCTAGAAGCCTTGGAAAATTCTAAGTTACAAGAGTTTCTCATGGACCGTGGCCATACGATTGATATCCTACAAGGAGAGATTGCGGTCAAATGTCAGGATGTGCTACTGCTAAAAGAGAAGTTTGACAAACGAATCCCGCTATCACAAATACTTTCTTCTAGCCAAACTTCATCAATCTTTGCCTCTTCAAGTTCATCTTTTGTAAGCACCGCAACACCTCTCGAGGCAGAGGCTGAGAACTACGAGACACCAAAAAAGAATTTGGAACAATATGATTCTTATGGAATTTTTGACAATAATGGTAACGAAGAAACGACGAATTCTCCTAGTGGTAAAGAAAAAAAGGTTGTTAGTGAACTTAAGGGGGTTTTGGATGATGATGAATGGGAGCTATTTGATAATGGCTGCTGTAGATGA | 1566 | 39.59 | MGFNSVFRVLQELFPQVDSRFLKAVSLEYPDVDLAVEAVLVETMSDIREQPLTMGSSSNSRSSLGFSNDNGKAGKVKSTKDHVVVNSFISERSTEDHASSVDGSSLGVTEAIDAENSENKANCYYVHPPLETFGETNNINADTASPVVIRENASLDDHDQVHVDENTLVASESNRFVDISETNLAAEDIEKDGSVTNSVNSEDELVLSSVLTRSEQICSTEYLDEVIEDAKNNKKMLASAMNSVIDLMKVVESKEKAAEQADEDATRGCSDILAKVDEVKHALLRAKEANDMHAGEVNAEKAILATELKELQLRLFNLSDERNKALAILEEMHRALEIRMAAALEEIASAEQKKLERERSAREALLYQESQMEKVVEESKKLKLEALENSKLQEFLMDRGHTIDILQGEIAVKCQDVLLLKEKFDKRIPLSQILSSSQTSSIFASSSSSFVSTATPLEAEAENYETPKKNLEQYDSYGIFDNNGNEETTNSPSGKEKKVVSELKGVLDDDEWELFDNGCCR | 521 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cobi6g01000 | 521 | Coils | Coil | 326 | 361 | - | - | |
| Cobi6g01000 | 521 | Coils | Coil | 294 | 321 | - | - | |
| Cobi6g01000 | 521 | MobiDBLite | consensus disorder prediction | 51 | 75 | - | - | |
| Cobi6g01000 | 521 | MobiDBLite | consensus disorder prediction | 477 | 497 | - | - | |
| Cobi6g01000 | 521 | MobiDBLite | consensus disorder prediction | 51 | 73 | - | - | |
| Cobi6g01000 | 521 | ProSiteProfiles | CUE domain profile. | 2 | 44 | IPR003892 | GO:0043130(InterPro) | |
| Cobi6g01000 | 521 | PANTHER | OS10G0315400 PROTEIN | 1 | 518 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cobi6g01000 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cobi | Cobi-Chr4:6505195 | Cobi6g01000 | Cobi-Chr6:8039811 | dispersed | |
| Cobi | Cobi-Chr4:6510315 | Cobi6g01000 | Cobi-Chr6:8039811 | dispersed | |
| Cobi | Cobi-Chr6:8039811 | Cobi6g01143 | Cobi-Chr6:9245989 | dispersed | |
| Cobi | Cobi-Chr2:70840212 | Cobi6g01000 | Cobi-Chr6:8039811 | wgd | |
| Cobi | Cobi-Chr4:6783497 | Cobi6g01000 | Cobi-Chr6:8039811 | wgd |