AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi6g01031 ATGGAAGCGACTACCACACGGTTTGGTTCGGTTTTGCTTTTGTTTGCCGTGTTTGTGATGCTTGTGTCTGCTTCGGCAGATAGTGGTTATGGAAAGCCACAGTTTGAGGGATATGTGCCACCAAAAGAGCATGACGCCTATGAAAAGACCAGTCCTAAGATACCAACAAAACCGGTGATCCCAAAAGGGGAGCATGTAAGCTATGAGAAGGTCGATCCTAAGATACCAACAAAACCCGTGATGCCAAAAGAAGAACATGACACGTACGAGAAGAACTATCCTAAGTTGCCAACAAAACCCGTACTACCAAAAGAAGAACATGGCGCGTATGAAAAGAGTAATCCTAAGTTACCAACAAAACCAACACTACCAAAAGAGAAATATGACTCCTATGAAAAGAGCTACCCTAAATTTCCTACAAAGCCAATGATACCAAAACCCGAAAAGCCAGTGTTACCTGAGGCACTTAAGCACCCGAAGAACATAGCGGTTCAAGGCCTTATTTATTGTAAATATGGTTCCAAGCTCATCCCACTCCAAGGAGCTACAATGAAAGTGACTTGCTTGACCGTGCCTAAGAACGGATACCGATCAACATCATACTCGTTCTCGAGTTGTCCAGCGGACGAGAAGGGTTACTTCTTAGCCAAAATGCCATTTTCGACGCTACTAAAAGACGATACATGGGAAATAACCGAGTGTAAGGCTTTCCTTGAAAACTCGCCATGGAGCAGTTGCAAGGTTCCAGAAAATACCAACGGGGGAATTACCGGTGCACGCCTTACATTTTCTCGTCACCTCAACCGTGACGGATATTGTTTGTCATCGGTAGGCCCTTTTATATACAACCCCGGTCAAGAGTCTTTACCTAAGGAAGGCTATTAG 885 44.52 MEATTTRFGSVLLLFAVFVMLVSASADSGYGKPQFEGYVPPKEHDAYEKTSPKIPTKPVIPKGEHVSYEKVDPKIPTKPVMPKEEHDTYEKNYPKLPTKPVLPKEEHGAYEKSNPKLPTKPTLPKEKYDSYEKSYPKFPTKPMIPKPEKPVLPEALKHPKNIAVQGLIYCKYGSKLIPLQGATMKVTCLTVPKNGYRSTSYSFSSCPADEKGYFLAKMPFSTLLKDDTWEITECKAFLENSPWSSCKVPENTNGGITGARLTFSRHLNRDGYCLSSVGPFIYNPGQESLPKEGY 294
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi6g01031 294 MobiDBLite consensus disorder prediction 73 126 - -
Cobi6g01031 294 Pfam Pollen protein Ole e 1 like 164 258 - -
Cobi6g01031 294 PANTHER OS01G0164075 PROTEIN 13 285 - GO:0071944(PANTHER)
Cobi6g01031 294 MobiDBLite consensus disorder prediction 73 93 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi6g01031 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
377592 Cobi2g02269 Cobi6g01031
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1804578 Cobi Cobi6g01031 Cobi-Chr6:8283249 Cobi7g01767 Cobi-Chr7:14789452
1849185 Cobi Cobi2g02350 Cobi-Chr2:71424923 Cobi6g01031 Cobi-Chr6:8283249
1849461 Cobi Cobi2g02269 Cobi-Chr2:69399286 Cobi6g01031 Cobi-Chr6:8283249