Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cobi6g01045 | ATGGCAACGAATTGGAAACTGGCCGATCACCCGAAACTACCGAAAGGAAAGACAATTGCCGTCGTGGTTTTGGACGGTTGGGGTGAGGCTTCACCTAACCAATACAATTGCATCCATGTCGCCGAGACGCCTACGATGGATTCTCTCAAAAATACTGCCCCTGATTGGTGGAGATTGGTGAAGGCTCATGGTAAGGCCGTGGGGCTCCCCACAGACGATGACATGGGGAACAGTGAAGTCGGGCATAATGCTCTTGGTGCCGGACGAATTTTTGCTCAAGGTGCAAAACTTGTTGATAATGCTCTTGCATCTGGAAAAATTTATGAAGATGAAGGTTTTAATTACATTAAGGAATCTTTTGCAAATAACACTTTGCACCTTATTGGATTGATGAGTGACGGGGGTGTGCACTCACGTCTTGATCAGTTACAGTTACTGCTCAAAGGTGCTAGTGAACGCGGTGCCAAGAGGATACGCGTTCATGTACTTACTGATGGCCGTGATGTTGTGGACGGAACAAGTGTCGATTTTGCAGAAACACTTGAAAAGGATCTTGCAGAGCTTCGTGGTAAAGGCATTGATGCACAGATTGCTTCTGGTGGGGGACGCATGTATGTCACCTTGGACCGTTATGAGAACGACTGGGAAGTTGTGAAACGCGGTTGGGACGCTCAGGTTCTCGGCGAAGCCCCACACAAATTTAAAAATGCTGTTGAGGCCATCAAGAAGCTAAGGGAAGCTCCCAATGCTAATGACCAATACTTACCACCATTTGTGATTGTCGATGATAGCGGGAAGCCTGTTGGGCCCGTAAACGATGGTGATGCAGTTGTCACATTTAACTTCCGAGCTGATCGTATGACAATGCTTGCACAAGCTCTCGAGTATGAAAAGTTTGATAAGTTTGACCGAGTTCGGTTCCCTAAAATCCGCTATGCGGGAATGCTTCAATATGATGGCGAGTTGAAGCTTCCAAATCATTATCTTGTTTCGCCTCCATTGATCGAGAGGACTTCGGGTGAATATTTGGTTAAAAACGGGATCCGCACCTTTGCTTGCAGTGAAACGGTCAAATTCGGTCATGTCACATTTTTCTGGAACGGGAACCGCTCTGGATATTTTAATGGAGAGTTAGAGAAATATGTGGAAATTCCAAGTGATAGTGGAATTACATTCAATGTTCAACCAAAAATGAAGGCTTTGGAGATTGGTGAGAAGGCCAAAGAAGCCATTCTTAGCCGCAAATATGACCAGATAAGAGTGAATATACCAAATGGAGACATGGTTGGGCATACTGGTGACATTGAGGCTACAGTTGTGGCCTGCAAGGCTGCTGATGAAGCTGTTAAGATGATTCTTGATGCAGTAGAACAAGTGGGTGGAATATATGTGGTAACTGCAGATCATGGTAATGCAGAAGACATGGTGAAAAGAGACAAGAAGGGAGAGCCTATTGTTGGCAAGGATGGCAAAGTTCAAATCCAAACCTCTCACACTCTTCAACCGGTGCCGGTTGCAATTGGAGGCCCAGGATTATCGAAAGGTGTGAAGTACCGGAAGGATGTCCCGGATGGTGGACTAGCAAATGTGGCTGCAACTGTGATGAATCTGCACGGGTTCGTGGCTCCAGATGACTATGAGACAACACTTATTGAAGTTGATTAA | 1665 | 45.83 | MATNWKLADHPKLPKGKTIAVVVLDGWGEASPNQYNCIHVAETPTMDSLKNTAPDWWRLVKAHGKAVGLPTDDDMGNSEVGHNALGAGRIFAQGAKLVDNALASGKIYEDEGFNYIKESFANNTLHLIGLMSDGGVHSRLDQLQLLLKGASERGAKRIRVHVLTDGRDVVDGTSVDFAETLEKDLAELRGKGIDAQIASGGGRMYVTLDRYENDWEVVKRGWDAQVLGEAPHKFKNAVEAIKKLREAPNANDQYLPPFVIVDDSGKPVGPVNDGDAVVTFNFRADRMTMLAQALEYEKFDKFDRVRFPKIRYAGMLQYDGELKLPNHYLVSPPLIERTSGEYLVKNGIRTFACSETVKFGHVTFFWNGNRSGYFNGELEKYVEIPSDSGITFNVQPKMKALEIGEKAKEAILSRKYDQIRVNIPNGDMVGHTGDIEATVVACKAADEAVKMILDAVEQVGGIYVVTADHGNAEDMVKRDKKGEPIVGKDGKVQIQTSHTLQPVPVAIGGPGLSKGVKYRKDVPDGGLANVAATVMNLHGFVAPDDYETTLIEVD | 554 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cobi6g01045 | 554 | SUPERFAMILY | 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain | 93 | 328 | IPR036646 | GO:0004619(InterPro)|GO:0005737(InterPro) | |
| Cobi6g01045 | 554 | Gene3D | - | 93 | 337 | IPR036646 | GO:0004619(InterPro)|GO:0005737(InterPro) | |
| Cobi6g01045 | 554 | NCBIfam | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | 18 | 546 | IPR005995 | GO:0004619(InterPro)|GO:0006007(InterPro) | |
| Cobi6g01045 | 554 | Pfam | BPG-independent PGAM N-terminus (iPGM-N) | 98 | 319 | IPR011258 | GO:0004619(InterPro)|GO:0005737(InterPro)|GO:0006007(InterPro)|GO:0030145(InterPro) | |
| Cobi6g01045 | 554 | SUPERFAMILY | Alkaline phosphatase-like | 18 | 545 | IPR017850 | - | |
| Cobi6g01045 | 554 | PIRSF | IPGAM | 12 | 554 | IPR005995 | GO:0004619(InterPro)|GO:0006007(InterPro) | |
| Cobi6g01045 | 554 | Pfam | Metalloenzyme superfamily | 17 | 540 | IPR006124 | GO:0003824(InterPro)|GO:0046872(InterPro) | |
| Cobi6g01045 | 554 | Gene3D | Alkaline Phosphatase, subunit A | 20 | 543 | IPR017850 | - | |
| Cobi6g01045 | 554 | FunFam | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | 93 | 336 | - | - | |
| Cobi6g01045 | 554 | PANTHER | 2,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE | 5 | 552 | IPR005995 | GO:0004619(InterPro)|GO:0006007(InterPro)|GO:0030145(PANTHER)|GO:0044262(PANTHER)|GO:0046537(PANTHER) | |
| Cobi6g01045 | 554 | CDD | iPGM | 17 | 551 | IPR005995 | GO:0004619(InterPro)|GO:0006007(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cobi6g01045 | K15633 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 69720 | Cobi11g02685 | Cobi6g01045 | |
| 70596 | Cobi1g03317 | Cobi6g01045 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 1830659 | Cobi | Cobi1g03317 | Cobi-Chr1:82568006 | Cobi6g01045 | Cobi-Chr6:8398414 | |
| 1842293 | Cobi | Cobi11g02685 | Cobi-Chr11:70519887 | Cobi6g01045 | Cobi-Chr6:8398414 |