AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi6g01047 ATGGATATCGAGAAGAAAGAAGAACAACCACTCCGATCAACCCCCGCCACCGTCGCCGGCCCCATCTCCGGCGACCCGACTAAACCCAAACGCCGGCGCTGCAAAATAATCTGCTTATCAATACTCGCAGTACTTCTCACCATTACCATAGTCATAATCATATTAGCCTTCACCGTCTTCAAAGCCAAAAAAACGGTAACCACCGTCACCTCCGTCGCACTGCAGGACTTCGACGTCTCCATCATTCCACTTCCACCTTCCGTCAGATTAAACGTATCACTCGCACTCGGCATCTCAATCAAAAACCCTAACAAGGTCAGTGTCAAGTACCACAGCAGCTCCGCCACGCTCCGGTACAGAGGGCGTGACGTCGGCGACGTTCCGATACCCGCCGGAAAACTTGGATCCGATGATACGGAGCAGTTGAATCTGACGGTGACTATATTTGCTGATCGGGTTATGATGGATCCGCAGATATATACGGATATTTTGGGAGGTAATTTGCCGATATCGACTTATACGAAAATAAAAGCTAAAGTTCGTGTAGTGGTGTTTAATATTCATGTGACGTCAACGTCAACTTGTGATATTAATATTGATGTGAGGAATAGAAGCGTTGCTGATGAAACTTGTCACTACCAGAACAAATTAAAGTGA 657 46.88 MDIEKKEEQPLRSTPATVAGPISGDPTKPKRRRCKIICLSILAVLLTITIVIIILAFTVFKAKKTVTTVTSVALQDFDVSIIPLPPSVRLNVSLALGISIKNPNKVSVKYHSSSATLRYRGRDVGDVPIPAGKLGSDDTEQLNLTVTIFADRVMMDPQIYTDILGGNLPISTYTKIKAKVRVVVFNIHVTSTSTCDINIDVRNRSVADETCHYQNKLK 218
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi6g01047 218 MobiDBLite consensus disorder prediction 1 29 - -
Cobi6g01047 218 SUPERFAMILY LEA14-like 89 165 - -
Cobi6g01047 218 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 28 204 - -
Cobi6g01047 218 Gene3D - 49 200 - -
Cobi6g01047 218 Pfam Late embryogenesis abundant protein 98 195 IPR004864 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi6g01047 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
69719 Cobi11g02684 Cobi6g01047
377585 Cobi2g02240 Cobi6g01047
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1800468 Cobi Cobi4g01859 Cobi-Chr4:27870717 Cobi6g01047 Cobi-Chr6:8409259
1842292 Cobi Cobi11g02684 Cobi-Chr11:70518158 Cobi6g01047 Cobi-Chr6:8409259
1849451 Cobi Cobi2g02240 Cobi-Chr2:68868838 Cobi6g01047 Cobi-Chr6:8409259