AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi6g01055 ATGGCCAAACGCTCTGCATCGGCATTGAGTACCAAGAGCTTAGAAATGTGTACGGAGAGTTTGGGGAGTGAGACTGGGAGTGAAGTTAGTGAAAGTGGTGATGAGTTTTCTGCAATTTCACTATTGGAAAGGGAGAGATTGAGGGAAACTCAACGGTTAACTTGCCGGAATCTTGACCGGAAAATTCTCCGGGGTGACTTTCCGCCGCCGTTGACTTCCATCAGTGGCTCCGATGGGGCGCTGAAGGTGAGGCACCACCGTGAGGGTGGACGGTTGGTTATTAACGCTGAGAGTGTTTTTAACTGCGGTACAAGTTTTCAAGCGGAACGTACAAACGGGAGGCTTAAGCTTTCTTTGTTGAGGGAGTGTTGTGTAGATTATGAAAGTGGAGGGGGTGAAGTGGAAGAGTTTGAAAGTGAAGGGGGTGAAATGGAAAATTATGAAAGTGAAGGGGGTGAAGTGGAAGATTTTGAAAGTGAAGGATGTGAAGTGGAAGATTATGTAAGTGAAGGTGATGATGATGAGGAGGAGGAGGAGAGCGGTGGTTTGTGGCGGGACATGGACGGAAAGCGGTGGACGATTGCTGGAAAGGCGGAGTTGAATTGGCTAACAAGGTGCCATGAGGGTGGAAATGGCAACAAAGTGTTTGCAAATTGGGATTCTTCATGGGTGGCAATTTCTTGA 684 47.95 MAKRSASALSTKSLEMCTESLGSETGSEVSESGDEFSAISLLERERLRETQRLTCRNLDRKILRGDFPPPLTSISGSDGALKVRHHREGGRLVINAESVFNCGTSFQAERTNGRLKLSLLRECCVDYESGGGEVEEFESEGGEMENYESEGGEVEDFESEGCEVEDYVSEGDDDEEEEESGGLWRDMDGKRWTIAGKAELNWLTRCHEGGNGNKVFANWDSSWVAIS 227
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi6g01055 227 Pfam Fantastic Four meristem regulator 66 119 IPR046431 -
Cobi6g01055 227 MobiDBLite consensus disorder prediction 134 186 - -
Cobi6g01055 227 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 2 221 IPR021410 -
Cobi6g01055 227 MobiDBLite consensus disorder prediction 134 182 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi6g01055 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cobi Cobi-Chr4:6616370 Cobi6g01055 Cobi-Chr6:8481403 dispersed
Cobi Cobi-Chr6:8481403 Cobi9g01434 Cobi-Chr9:55123410 dispersed
Cobi Cobi-Chr2:71799886 Cobi6g01055 Cobi-Chr6:8481403 wgd