Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cobi6g01364 | ATGGCGTCTCACTCCTTAACTTGTTGTACCAACTTTCGCTTCGCACTTAACTTATCCTCCAAACCCCAATTGGATTCTGGACTCAGATCATCTAATCGATACGTATATAGCTTACCCACTTCATCGATTCGCGCCATGGGTTCTTCGTCTTCTTCATCGCAGAAACCAGATACCAGAACCAATCAACAAGAGGATTATAAATCTGTTAGTGAACAAGAATGGAAGAAGAAGCTGAGCGGAGAACAGTTTTATGTAACTCGAAAAAAGGGAACAGAAAGGGCGTTTACAGGGGAATACTGGAATACGAAAACCCCTGGGACTTACCATTGCATCTGCTGTGACACTCCGCTCTTCGAGTCAACCACGAAATTCGATAGTGGAACAGGTTGGCCATCATATTACAAGCCAATAGGAACAAATGTGAAGTCGAAGCTCGATCTTTCAATCATATTTATGCCCCGACAAGAAGTCTTATGTGCGGTTTGTGATGCTCATCTTGGTCATGTTTTCGACGATGGTCCTCCGCCCACCGGAAAACGTTATTGCATCAACAGCGCTTCTCTGAAATTGAACCCAAAGTAG | 582 | 43.99 | MASHSLTCCTNFRFALNLSSKPQLDSGLRSSNRYVYSLPTSSIRAMGSSSSSSQKPDTRTNQQEDYKSVSEQEWKKKLSGEQFYVTRKKGTERAFTGEYWNTKTPGTYHCICCDTPLFESTTKFDSGTGWPSYYKPIGTNVKSKLDLSIIFMPRQEVLCAVCDAHLGHVFDDGPPPTGKRYCINSASLKLNPK | 193 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cobi6g01364 | 193 | MobiDBLite | consensus disorder prediction | 43 | 59 | - | - | |
| Cobi6g01364 | 193 | Pfam | SelR domain | 73 | 191 | IPR002579 | GO:0033743(InterPro) | |
| Cobi6g01364 | 193 | Gene3D | Peptide methionine sulfoxide reductase. | 49 | 193 | - | - | |
| Cobi6g01364 | 193 | ProSiteProfiles | Methionine-R-sulfoxide reductase (MsrB) domain profile. | 71 | 193 | IPR002579 | GO:0033743(InterPro) | |
| Cobi6g01364 | 193 | FunFam | Peptide methionine sulfoxide reductase MsrB | 62 | 193 | - | - | |
| Cobi6g01364 | 193 | PANTHER | METHIONINE SULFOXIDE REDUCTASE | 45 | 192 | IPR028427 | GO:0005737(PANTHER)|GO:0006979(InterPro)|GO:0016671(InterPro)|GO:0030091(InterPro)|GO:0033743(PANTHER) | |
| Cobi6g01364 | 193 | MobiDBLite | consensus disorder prediction | 43 | 71 | - | - | |
| Cobi6g01364 | 193 | NCBIfam | peptide-methionine (R)-S-oxide reductase MsrB | 70 | 192 | IPR002579 | GO:0033743(InterPro) | |
| Cobi6g01364 | 193 | SUPERFAMILY | Mss4-like | 69 | 192 | IPR011057 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cobi6g01364 | K07305 | peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cobi | Cobi-Chr4:84567820 | Cobi6g01364 | Cobi-Chr6:11070070 | dispersed | |
| Cobi | Cobi-Chr4:10523037 | Cobi6g01364 | Cobi-Chr6:11070070 | transposed | |
| Cobi | Cobi-Chr6:83875 | Cobi6g01364 | Cobi-Chr6:11070070 | wgd |