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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi6g01374 ATGTGGAAGTACACGTGGATCGTGATTTTGATGCTTCTAGAAACTATCTTCGCTAAAGCTGAGTCAACGATCTACTTGCCTACTGATTCTGTATCTTCTGTAATGACTTCCACGTGTCCGGCGCCAGACGCTAGTCTCAACTACCGTCCGATTATCGGAATCGTTAGCCATCCCGGCGATGGCGCCTCCGGCCGACTGAGTAATGCTACTAATGCTTCGTATATTGCTGCTTCGTATGTGAAGTTTGTTGAATCTGCGGGTGCTAGGGTTATTCCGCTCATCTACAACGAACCGCTTAGTAATCTCCAAGCTAAGCTCAATTTGGTAAATGGGGTGCTTTTTACAGGTGGATGGGCTAAAAGTGGCCTCTACTTTGAAGTCATTGAGGGAATATTTAAGCATGTATTGAAGAAGAATGATGCAGGTGAACACTTCCCATTGCTTGCAATATGCTTAGGATTTGAACTCCTAACGATGATTATTAGCAAAAACAATGATATCCTTGAAGCCTTTAGTGCATCTGATCAAGCATCTACACTCCAATTCATGAACAACATTAATATTCAAGAAACATTGTTTCAAAGATTTCCTCCTGAATTGATCGCAAAGTTGAGCACTGAATGCCTTGTGATGCAAAACCATAAATATGGCATATCACCAGAAACATTTCAAAGTAACACCGAACTGTGCAGCTTCTTCAAGATCTTAACTACCAGTACCGACCAAGACAACCAGGTATATGTATCGACGGTGCAATCAGAAAGATATCCGGTGACTGCTGTCCAGTGGCACCCAGAGAAAAACGCTTTCGAGTGGGGGTCGTCGATGATTCCACATTCGGATGATGCAATTCAAGTGACTCAACATGTTGCCAACTTTTTCATAAGCGAGGCTAGAAAATCATTGAACAGACCGCCTACTGAAGAAGTGCTTGCTAACCTTATTTACAATTATAGCCCCACTTATTGTGGGACCGCAGGGAAAGGATATGATGAGGTTTACATATTCTCCGATAGCGAAAAGGTCGCACGACTTTGA 1038 42.97 MWKYTWIVILMLLETIFAKAESTIYLPTDSVSSVMTSTCPAPDASLNYRPIIGIVSHPGDGASGRLSNATNASYIAASYVKFVESAGARVIPLIYNEPLSNLQAKLNLVNGVLFTGGWAKSGLYFEVIEGIFKHVLKKNDAGEHFPLLAICLGFELLTMIISKNNDILEAFSASDQASTLQFMNNINIQETLFQRFPPELIAKLSTECLVMQNHKYGISPETFQSNTELCSFFKILTTSTDQDNQVYVSTVQSERYPVTAVQWHPEKNAFEWGSSMIPHSDDAIQVTQHVANFFISEARKSLNRPPTEEVLANLIYNYSPTYCGTAGKGYDEVYIFSDSEKVARL 345
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi6g01374 345 ProSiteProfiles Gamma-glutamyl hydrolase domain profile. 41 337 IPR015527 GO:0008242(InterPro)
Cobi6g01374 345 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 65 303 - -
Cobi6g01374 345 PANTHER PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE 15 337 IPR015527 GO:0005773(PANTHER)|GO:0008242(InterPro)|GO:0034722(PANTHER)|GO:0046900(PANTHER)
Cobi6g01374 345 Pfam Peptidase C26 50 266 IPR011697 GO:0016787(InterPro)
Cobi6g01374 345 FunFam Folate gamma-glutamyl hydrolase 46 337 - -
Cobi6g01374 345 SUPERFAMILY Class I glutamine amidotransferase-like 73 335 IPR029062 -
Cobi6g01374 345 Gene3D - 46 337 IPR029062 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi6g01374 K01307 gamma-glutamyl hydrolase [EC:3.4.19.9]