AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi6g01375 ATGGCCGACCTCGAAACCCTAGGTATTCTCGACGAGATTCAAGCACTCGTCTCTGATAAGCTTCAAGTGGTATCTTACAAGTGGTTGAGTAGGAATTATTTTGTGTCATCAGATACTGCTAAGAGGCTGCTTCAAGAGTTTGTGGAAAAGAATGGAAGTCAGTTGGAAGTTATTTATTCTCTATCTGGTTGGATGAAAAATAATCCGGAAGCATACCATGTAAAGCTTGTCCTGGGCTCTAAACTTTCAGAAATTAAACAAGAATTTGGTGATGGCTGTTCAGTTCAAGTCTATAGTGTCCAATCTTCTGTTCCTAAAGACCCAGCAGTTATTTGGAATGCTGAGTTCGTACAATCAGAGGAGCTATTCAAGGAGCCTTCAAATGTTATTAACTGCTTGCGTGATAACCGGTTTTGTGGTGTTTCGAATTCATTTGTAAAACGCAACGCAGAGGGGACAACTGTTATAAGCAGCGCAGGTCCACAGTTAAAAAGTGTGGGAGTTCATGGACAATTAAAAACTAATTCTATAAATCAAAAGCCCGACATTTCACTTGGAAAAGAAAAGAAGATTGAACAATTAAACCCTAAACCTAATCAAGCCGTAAATGTCCAAAGCGGAACTCATAAAGAACAAGTTCCTCAAAACAAAAAGAAAATACCAAATGATAAAACCTCATCAGGGACTTCAAGCTCATTAGCTAGCATGTGGGGTCGTGCATCTGCAAAACCAAAACCAGAGTCTGCTTCAGTTAAAACTGAAACGATCGTTCCTATTTCTAATGATGCGCAGGTGCGTGCTAATGAGTCTGTAGAGGATGAAAGCAGTGATGATGGTGATGATGATCAACAAATGAACTTCAAACGAACGTCTAATGGTGAAGGAAATAATAATAATAATAATAATAATAATAGAAAAAGACGGGTTGTGATGGATTACTCTGATGATGAAGATGATAATGTTGAAGACGCAGTGAATCTTGCATCACCAGATCCACCAAAAAAGCAAGTTTCAGTTCTTGATTCCAAGAAAAGCTCTACCATTTCAGGTCTTGAAAGTAAAAATTTGGATTTTGTTGAAGAGAAAGAAGTTAAGAACGAAAAGGAAGAAAAAACGAGCGATGCGGCTAAAGACGGGAGTAAAAAGAGAAAAGTTTTGAAGACACGAATCGATGATCGTGGAAGAGAAGTAACCGAGGTGGTTTGGGAGGATGATGAGAAAGAAACAAAACATGATGACGATACAAGAAAAGATAAAGGTGACAATAAAACCACAAACAATGTTGTTAACAGGCCCGTTGCAGCAGCTCCTAAGAAGTCACCTGCGGTGTCACATGCAACAGGCAAAGCAGGAAACAAGAAAACCAACGTGAAGGATCCTAAACAGGGGAATATTATGTCGTTTTTCAAAAAGAAGGTTTAA 1422 38.82 MADLETLGILDEIQALVSDKLQVVSYKWLSRNYFVSSDTAKRLLQEFVEKNGSQLEVIYSLSGWMKNNPEAYHVKLVLGSKLSEIKQEFGDGCSVQVYSVQSSVPKDPAVIWNAEFVQSEELFKEPSNVINCLRDNRFCGVSNSFVKRNAEGTTVISSAGPQLKSVGVHGQLKTNSINQKPDISLGKEKKIEQLNPKPNQAVNVQSGTHKEQVPQNKKKIPNDKTSSGTSSSLASMWGRASAKPKPESASVKTETIVPISNDAQVRANESVEDESSDDGDDDQQMNFKRTSNGEGNNNNNNNNNRKRRVVMDYSDDEDDNVEDAVNLASPDPPKKQVSVLDSKKSSTISGLESKNLDFVEEKEVKNEKEEKTSDAAKDGSKKRKVLKTRIDDRGREVTEVVWEDDEKETKHDDDTRKDKGDNKTTNNVVNRPVAAAPKKSPAVSHATGKAGNKKTNVKDPKQGNIMSFFKKKV 473
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi6g01375 473 MobiDBLite consensus disorder prediction 192 463 - -
Cobi6g01375 473 MobiDBLite consensus disorder prediction 196 211 - -
Cobi6g01375 473 MobiDBLite consensus disorder prediction 219 237 - -
Cobi6g01375 473 MobiDBLite consensus disorder prediction 339 353 - -
Cobi6g01375 473 MobiDBLite consensus disorder prediction 355 424 - -
Cobi6g01375 473 Pfam DNA polymerase subunit Cdc27 23 472 IPR019038 GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0043625(InterPro)
Cobi6g01375 473 MobiDBLite consensus disorder prediction 288 307 - -
Cobi6g01375 473 FunFam DNA polymerase delta subunit 7 149 - -
Cobi6g01375 473 Gene3D DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 7 144 IPR041913 -
Cobi6g01375 473 PANTHER DNA POLYMERASE DELTA SUBUNIT 3 1 472 IPR019038 GO:0003887(PANTHER)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0006271(PANTHER)|GO:0006297(PANTHER)|GO:0043625(PANTHER)|GO:0043625(InterPro)|GO:1904161(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi6g01375 K03504 DNA polymerase delta subunit 3