Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cobi6g01383	ATGGCGGACGAGAAAGAGGTAAAGGAGGAAGTTGTTGAAGAGAAGAATGATAAGAAGAATAAGAAGAAGAAAGGTGTCTTCTCTCGGATTTGGAATGCGGTGTTTGGATTACGTGGTGATGACTTTGAGAAGAGGCTGCAATACATATCTAAAGAAGAAGCTACTCTTCATAACAGGATTAAGAGGCGAGCTATGAGATGGAGAACAACTGCCAGGAATCTGATTATCTTTTCTGTTCTTCTTGAGTTGGTTGCAATAGGTTATGCTATAATGACCACAAGAACAATAGACATGGATTGGAGAATGAGATCATTGCACGTGTTACCTATGTTTCTTTTGCCTGCATTGTCGTTCGGTTTGCATTACGGACTTTCAAGATTCACTAAATATTGTGATCGAAGGGATAAGAAAGCCTTAGAGAAGCTTCAAGAAGAAAGACAAGCAAAAATTGACGAACTCAAAGAGAGAACTAATTATTACATCACTCAGCAACTCATTCAGAAATACGACCCAGATCCAGCAGCAAAAGCAGCTGCTGCATCGGTTCTTGCATCAAAACTTGGTGCAGATTCGGGCCTGAAAGTGTTTCTTGAACACGAATTACAACCGAACACATATGACACGGGAAAGAGCAGTGATTTTGAGCTTCAACAATCTACTGGTCTCAGAAAACGAAATCAATCAAACCCTAAATCTCCTGGAAGCAGACAACAATCTGATAAGCAAACACCTCAATTTGGAGAAAATGAGGTTTCCGAGAGTTTAACATATGATAATCTTGTTGTTGAGCATCATAATCCTGCAGATGCAGGTTCTCAAGATGGCAGTTGGCTTGCTAAAATTGCTGCATTGCTTGTGGGAGAGGATCCTACTGAATCTTATGCACTTATATGTGGAAATTGCCATATGCATAATGGTCTAGCAAGAAAAGAGGATTTCCCGTTTATTACTTACTATTGTCCGCACTGTCACGCGTTAAACAAACCAAAGAATTCGGTTTCTTCGGATACAATAGCAAGTGCGAATGTTAAGATGACTGAAGATAGTAACGAGTCAACAGGTGAGAAAGTATCTGCTGTTAGCGATCGTGAGGTAGCTACTGCAGAAGAGAAAGATGCAAATGAGCAAACAGTGGCTGCATAG	1143	40.42	MADEKEVKEEVVEEKNDKKNKKKKGVFSRIWNAVFGLRGDDFEKRLQYISKEEATLHNRIKRRAMRWRTTARNLIIFSVLLELVAIGYAIMTTRTIDMDWRMRSLHVLPMFLLPALSFGLHYGLSRFTKYCDRRDKKALEKLQEERQAKIDELKERTNYYITQQLIQKYDPDPAAKAAAASVLASKLGADSGLKVFLEHELQPNTYDTGKSSDFELQQSTGLRKRNQSNPKSPGSRQQSDKQTPQFGENEVSESLTYDNLVVEHHNPADAGSQDGSWLAKIAALLVGEDPTESYALICGNCHMHNGLARKEDFPFITYYCPHCHALNKPKNSVSSDTIASANVKMTEDSNESTGEKVSAVSDREVATAEEKDANEQTVAA	380

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cobi6g01383	380	MobiDBLite	consensus disorder prediction	345	380	-	-
	Cobi6g01383	380	PANTHER	ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK	18	374	IPR040115	GO:0071782(PANTHER)\|GO:0071786(InterPro)\|GO:0071786(PANTHER)
	Cobi6g01383	380	Coils	Coil	1	24	-	-
	Cobi6g01383	380	MobiDBLite	consensus disorder prediction	220	250	-	-
	Cobi6g01383	380	Pfam	Predicted integral membrane zinc-ribbon metal-binding protein	277	327	IPR019273	-
	Cobi6g01383	380	Coils	Coil	136	159	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cobi6g01383	K23292	endoplasmic reticulum junction formation protein lunapark

Event-related genes

Select	Gene_1	Gene_2	Event_name
	69664	Cobi11g02480	Cobi6g01383
	71817	Cobi3g01024	Cobi6g01383
	378082	Cobi4g03048	Cobi6g01383

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cobi	Cobi-Chr11:68634887	Cobi6g01383	Cobi-Chr6:11235642	wgd
	Cobi	Cobi-Chr3:13299562	Cobi6g01383	Cobi-Chr6:11235642	wgd
	Cobi	Cobi-Chr4:79558162	Cobi6g01383	Cobi-Chr6:11235642	wgd