Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cobi6g01419 | ATGTTATACTCTAGCAAGAACAGACTCTTCTCACCGACCAAACGGTTTAAAGTTAAGTCGACCAGATCTGAACCGGCGAGCATCCCCGCCGACGTCCTTCCGGCTATCGAACGGAGGAAGCTCATTCACTTGTTGCTGTTCGGTGCCGTTGGTCTTCCCGCTGCCGGAATGGTGGCACCTTATTCCGTCTTCTTCCCTCCGTCTAGAGGTGGCATTGTTGCTAAAGATGAGGATGGTAACTCTATTATAGCTTCAGAATGGGTGAAGATCCATGGACCTGGTGATAAAACACTTGCTCAAGGCATAAAGGGAGATCCTACATACATTATGGTTGAAAGCAACACTAGTCTTGCAACATATGGGATTAATGCAGTATGCACCCATCTTGGGTGCATTGTGCCATGGAACACGGTCGAAAAGAAGTTCATTTGCCCATGTCATGGTTCCCAGTACAACAAGGAGGGCACGATTCTTAAAGGCCCTGCTCAACTGTCTTTGGAACTGGCTAATGTGGATGTTAAAGATGACAAAGTGGTGTTTGCTCCATGGACACAAACCGATTTCAGAACAGGTGATGCTCCATTGTGGTCTTAG | 594 | 47.31 | MLYSSKNRLFSPTKRFKVKSTRSEPASIPADVLPAIERRKLIHLLLFGAVGLPAAGMVAPYSVFFPPSRGGIVAKDEDGNSIIASEWVKIHGPGDKTLAQGIKGDPTYIMVESNTSLATYGINAVCTHLGCIVPWNTVEKKFICPCHGSQYNKEGTILKGPAQLSLELANVDVKDDKVVFAPWTQTDFRTGDAPLWS | 197 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cobi6g01419 | 197 | SUPERFAMILY | ISP domain | 34 | 196 | IPR036922 | GO:0051537(InterPro) | |
| Cobi6g01419 | 197 | PRINTS | Rieske 2Fe-2S subunit signature | 142 | 154 | IPR005805 | GO:0016020(InterPro)|GO:0051537(InterPro) | |
| Cobi6g01419 | 197 | PRINTS | Rieske 2Fe-2S subunit signature | 154 | 166 | IPR005805 | GO:0016020(InterPro)|GO:0051537(InterPro) | |
| Cobi6g01419 | 197 | PRINTS | Rieske 2Fe-2S subunit signature | 121 | 132 | IPR005805 | GO:0016020(InterPro)|GO:0051537(InterPro) | |
| Cobi6g01419 | 197 | FunFam | Cytochrome b6-f complex iron-sulfur subunit | 66 | 197 | - | - | |
| Cobi6g01419 | 197 | ProSiteProfiles | Rieske [2Fe-2S] iron-sulfur domain profile. | 87 | 180 | IPR017941 | GO:0051537(InterPro) | |
| Cobi6g01419 | 197 | Pfam | Rieske [2Fe-2S] domain | 104 | 165 | IPR017941 | GO:0051537(InterPro) | |
| Cobi6g01419 | 197 | CDD | Rieske-cytochrome-b6f | 72 | 197 | - | - | |
| Cobi6g01419 | 197 | PANTHER | CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL | 15 | 184 | IPR014349 | GO:0005886(PANTHER)|GO:0016491(PANTHER)|GO:0051537(InterPro) | |
| Cobi6g01419 | 197 | Gene3D | - | 68 | 197 | IPR036922 | GO:0051537(InterPro) | |
| Cobi6g01419 | 197 | Gene3D | Single helix bin | 25 | 67 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cobi6g01419 | K02636 | cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 71792 | Cobi3g00927 | Cobi6g01419 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cobi | Cobi-Chr3:11311190 | Cobi6g01419 | Cobi-Chr6:11499410 | wgd |